Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29440 Brassica napus
A06p46270 Brassica napus
Aa31LG9G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis
Actinidia16800 Actinidia chinensis
Ah.14g087180 Amaranthus hybridus
AL8G12650 Arabidopsis lyrata
Aqoxy4G00415 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea
AT5G45900 Arabidopsis thaliana
ATR0733G019 Amborella trichopoda
Atru.chr10.1680 Acer truncatum
AUR62031177 Chenopodium quinoa
AUR62036593 Chenopodium quinoa
BcaC03g16799 Brassica carinata
BolC2t10723H Brassica oleracea
BraA02t07971Z Brassica rapa
C02p46710 Brassica napus
CAN.G689.28 Capsicum annuum
CANSAT35G0525 Cannabis sativa
CARHR176060 Cardamine hirsuta
Carub.0008s0205 Capsella rubella
Ca_21328_v3 Cicer arietinum L.
CBR_g39927 Chara braunii
CBR_g50802 Chara braunii
Cc11_g13830 Coffea canephora
CDE02G2814 Ceratophyllum demersum
CDE08G0418 Ceratophyllum demersum
CDE08G0836 Ceratophyllum demersum
Cfa000601 Carpinus fangiana
Cfa025052 Carpinus fangiana
Ciclev10014429m.g Citrus clementina
CiPaw.10G058200 Carya illinoinensis
ClCG01G023710 Citrullus lanatus
COL.COLO4_05490 Corchorus olitorius
Cpa.g.c47463 Carica papaya
Cpa.g.sc7.54 Carica papaya
Cre03.g165215 Chlamydomonas reinhardtii
CsaV3_6G050860 Cucumis sativus L.
CSS0029481 Camellia sinensis var. sinensis
CSS0045323 Camellia sinensis var. sinensis
CSS0049485 Camellia sinensis var. sinensis
DCAR_028009 Daucus carota
Dinv04615 Davidia involucrata
Dinv40666 Davidia involucrata
Duzib192G0329 Durio zibethinus
ECA236G1606 Erigeron canadensis
EL10Ac8g20512 Beta vulgaris
Eucgr.B01507 Eucalyptus grandis
Eucgr.B01514 Eucalyptus grandis
FAN11G2228 Fragaria x ananassa
FAN16G2124 Fragaria x ananassa
FAN21G0636 Fragaria x ananassa
FAN25G0256 Fragaria x ananassa
FvH4_3g07910 Fragaria vesca
Glyma.12G010000 Glycine max
Gohir.A05G155800 Gossypium hirsutum
Gohir.D05G158500 Gossypium hirsutum
Gorai.009G163500 Gossypium raimondii
GSVIVG01021202001 Vitis vinifera
HanXRQChr05g0156521 Helianthus annuus
HanXRQChr13g0397371 Helianthus annuus
Haze_06243 Corylus avellana
Haze_06244 Corylus avellana
Haze_26854 Corylus avellana
Hund21181 Selenicereus undatus
Lalb_Chr03g0024111 Lupinus albus
Lj1C1193T7 Lonicera japonica
Lj3g0011702 Lotus japonicus
Lsat_1_v5_gn_4_5981 Lactuca sativa
Lsat_1_v5_gn_7_23000 Lactuca sativa
Manes.17G054900 Manihot esculenta
Mapoly0015s0071 Marchantia polymorpha
MBI06_g25992_MAGBIO Magnolia biondii
MCO13G516 Micromonas commoda
MD05G1302300 Malus domestica
MD10G1281000 Malus domestica
Medtr0003s0540 Medicago truncatula
MELO3C007214.2 Cucumis melo
Migut.M01045 Erythranthe guttata
MSTRG.16147 Avicennia marina
Nitab4.5_0000158g0030 Nicotiana tabacum
Nitab4.5_0003937g0030 Nicotiana tabacum
Nn1g04384 Nelumbo nucifera
Nn1g09089 Nelumbo nucifera
Oeu039925.1 Olea europaea
Oeu041773.1 Olea europaea
Os01g0614900 Oryza sativa ssp. japonica
Peaxi162Scf00010g03612 Petunia axillaris
PGR004G0809 Punica granatum
PGSC0003DMG400019634 Solanum tuberosum
Phvul.011G010700 Phaseolus vulgaris
Potri.004G055600 Populus trichocarpa
Potri.011G065402 Populus trichocarpa
Pp3c24_8100 Physcomitrium patens
PRCOL_00005698 Prasinoderma coloniale
Prupe.4G060100 Prunus persica
Psat0s133g0080 Pisum sativum
Psat7g197320 Pisum sativum
PSO541G6035 Papaver somniferum
PSO675G7532 Papaver somniferum
QL05p046535 Quercus lobata
RcHm_v2.0_Chr2g0132441 Rosa chinensis
RcHm_v2.0_Chr5g0010641 Rosa chinensis
Rhsim13G0191000 Rhododendron simsii
Sabra04G0036300 Salix brachista
Sabra11G0047200 Salix brachista
SalBow8G4573 Salvia bowleyana
Sc17g0005780 Simmondsia chinensis
Sed0012124 Sechium edule
SEGI_08778 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00037 Striga asiatica
SHI28554 Sapria himalayana
SHI28555 Sapria himalayana
SHI28556 Sapria himalayana
SHI28558 Sapria himalayana
SHI28562 Sapria himalayana
SMO367G0884 Selaginella moellendorffii
Solyc11g068930.3 Solanum lycopersicum
Sopen11g027640 Solanum pennellii
Sp2g10820 Schrenkiella parvula
TAR627G0247 Trochodendron aralioides
THA.LOC104806153 Tarenaya hassleriana
Thecc.06G172000 Theobroma cacao
Thhalv10000804m.g Eutrema salsugineum
TPR.G8345 Trifolium pratense
TWI38G0673 Tripterygium wilfordii
TWI63G0032 Tripterygium wilfordii
unitig_0.g713 Utricularia gibba
vmacro01547 Vaccinium macrocarpon
VMungo1127G0781 Vigna mungo
Zm00001eb358160 Zea mays

User provided reference genes

Program Settings