Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17610 Brassica napus
A03p17620 Brassica napus
A04p29830 Brassica napus
A08p14640 Brassica napus
Aa31LG6G2540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4889 Anthoceros agrestis
Ah.08g212320 Amaranthus hybridus
Ah.11g040820 Amaranthus hybridus
AL7G33690 Arabidopsis lyrata
Aqoxy3G04101 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MH4CM1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN3XR3 Arachis hypogaea
AT4G20130 Arabidopsis thaliana
Atru.chr10.266 Acer truncatum
AUR62039890 Chenopodium quinoa
AUR62040329 Chenopodium quinoa
BcaB03g11658 Brassica carinata
BcaC01g00656 Brassica carinata
BolC3t20561H Brassica oleracea
BraA04t18443Z Brassica rapa
BraA08t33451Z Brassica rapa
C03p82790 Brassica napus
CAN.G809.40 Capsicum annuum
CARHR226960 Cardamine hirsuta
Carub.0007s2100 Capsella rubella
Ca_01979_v3 Cicer arietinum L.
Ca_28373_v3 Cicer arietinum L.
CBR_g61479 Chara braunii
Cc09_g01980 Coffea canephora
CDE02G4422 Ceratophyllum demersum
Cfa001144 Carpinus fangiana
Cfa001273 Carpinus fangiana
Ciclev10015087m.g Citrus clementina
CiPaw.09G138900 Carya illinoinensis
ClCG03G004130 Citrullus lanatus
COL.COLO4_24113 Corchorus olitorius
Cpa.g.sc30.93 Carica papaya
Cre03.g201332 Chlamydomonas reinhardtii
Cre08.g367350 Chlamydomonas reinhardtii
Cre16.g649700 Chlamydomonas reinhardtii
CsaV3_1G010060 Cucumis sativus L.
CSS0003156 Camellia sinensis var. sinensis
DCAR_003751 Daucus carota
Dinv05874 Davidia involucrata
Duzib168G0529 Durio zibethinus
Duzib187G1938 Durio zibethinus
ECA236G3447 Erigeron canadensis
EL10Ac3g07109 Beta vulgaris
Eucgr.D00007 Eucalyptus grandis
FAN16G2684 Fragaria x ananassa
FAN21G1611 Fragaria x ananassa
FAN25G2772 Fragaria x ananassa
FvH4_3g13130 Fragaria vesca
Glyma.09G049800 Glycine max
Glyma.15G156500 Glycine max
Gohir.A05G011700 Gossypium hirsutum
Gohir.D05G012400 Gossypium hirsutum
Gohir.D05G012700 Gossypium hirsutum
Gorai.009G012700 Gossypium raimondii
Gorai.N022300 Gossypium raimondii
GSVIVG01012161001 Vitis vinifera
HanXRQChr04g0116561 Helianthus annuus
HanXRQChr05g0144011 Helianthus annuus
Haze_05240 Corylus avellana
HPP92_009502 Vanilla planifolia
HPP92_009503 Vanilla planifolia
Hund25553 Selenicereus undatus
Lalb_Chr18g0052021 Lupinus albus
Lj1g0009858 Lotus japonicus
Lj1g0019510 Lotus japonicus
Lj1g0026190 Lotus japonicus
Lj3g0008154 Lotus japonicus
Lj4g0007893 Lotus japonicus
Lj6g0006059 Lotus japonicus
Lj6g0014924 Lotus japonicus
Lj6g0026320 Lotus japonicus
Lsat_1_v5_gn_7_27441 Lactuca sativa
Manes.03G071200 Manihot esculenta
Mapoly0003s0096 Marchantia polymorpha
MCO07G533 Micromonas commoda
MCO16G445 Micromonas commoda
MD05G1244700 Malus domestica
MD05G1244800 Malus domestica
MD05G1244900 Malus domestica
MD10G1226200 Malus domestica
Medtr2g035660 Medicago truncatula
MELO3C002396.2 Cucumis melo
Migut.M02023 Erythranthe guttata
Migut.O00467 Erythranthe guttata
MSTRG.18594 Avicennia marina
Nitab4.5_0000632g0140 Nicotiana tabacum
Nitab4.5_0000844g0330 Nicotiana tabacum
Nn7g38377 Nelumbo nucifera
Oeu008732.1 Olea europaea
Os05g0587200 Oryza sativa ssp. japonica
Peaxi162Scf00036g00158 Petunia axillaris
PGR004G1814 Punica granatum
PGSC0003DMG400012780 Solanum tuberosum
PGSC0003DMG401007333 Solanum tuberosum
Phvul.009G243500 Phaseolus vulgaris
Potri.003G155100 Populus trichocarpa
Pp3c8_21700 Physcomitrium patens
Prupe.4G119100 Prunus persica
Psat1g150560 Pisum sativum
PSO063G0366 Papaver somniferum
PSO782G3554 Papaver somniferum
QL11p011864 Quercus lobata
QL93p0142_0007 Quercus lobata
QL93p2001_0005 Quercus lobata
RcHm_v2.0_Chr3g0456081 Rosa chinensis
RcHm_v2.0_Chr5g0021381 Rosa chinensis
RcHm_v2.0_Chr5g0063511 Rosa chinensis
Sabra03G0112200 Salix brachista
Sc24g0002940 Simmondsia chinensis
Sed0025210 Sechium edule
SGA_v2.0_scaffold298G47711 Striga asiatica
SMO331G0022 Selaginella moellendorffii
Solyc02g081920.3 Solanum lycopersicum
Sopen02g026550 Solanum pennellii
Sp7g18560 Schrenkiella parvula
TAR636G0982 Trochodendron aralioides
THA.LOC104811881 Tarenaya hassleriana
Thecc.09G140900 Theobroma cacao
Thhalv10027180m.g Eutrema salsugineum
TPR.G26579 Trifolium pratense
TWI38G1305 Tripterygium wilfordii
TWI63G1685 Tripterygium wilfordii
unitig_37.g12046 Utricularia gibba
vmacro03562 Vaccinium macrocarpon
VMungo0344G0001 Vigna mungo
VMungo1309G1344 Vigna mungo
VMungo1383G1601 Vigna mungo
Zm00001eb345040 Zea mays

User provided reference genes

Program Settings