Gene: Carub.0007s2100

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s2100
  • Transcript Identifier Carub.0007s2100.1
  • Gene Type Coding gene
  • Location scaffold_7 : 7924090-7926675 : negative

Gene Family Information

  • ID HOM05D005861
  • #Genes/#Species 133/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s2100.v1.1
  • pacid 39234519
  • synonym Carubv10004703m.g

Descriptions

  • Description PTHR13271:SF23 - N-LYSINE METHYLTRANSFERASE EFM1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT4G20130
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT4G20130
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT4G20130
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT4G20130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT4G20130
GO:0000427
ISO
PLAZA Integrative Orthologyplastid-encoded plastid RNA polymerase complex AT4G20130
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G20130
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT4G20130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015353 Rubisco LSMT, substrate-binding domain
IPR001214 SET domain
IPR036464 Rubisco LSMT, substrate-binding domain superfamily
Mapman id Description
15.6.1.2.2.7 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP7/TAC14