Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12480 Brassica napus
A09p25360 Brassica napus
Aa31LG9G9180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis
Actinidia10096 Actinidia chinensis
Actinidia20188 Actinidia chinensis
Ah.05g179960 Amaranthus hybridus
AL6G48990 Arabidopsis lyrata
AL7G32980 Arabidopsis lyrata
Aqoxy5G03507 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea
AT4G05400 Arabidopsis thaliana
AT4G21140 Arabidopsis thaliana
ATR0594G138 Amborella trichopoda
Atru.chr10.871 Acer truncatum
AUR62004438 Chenopodium quinoa
AUR62023510 Chenopodium quinoa
BcaB01g01902 Brassica carinata
BcaC09g51255 Brassica carinata
BcaNung03840 Brassica carinata
BolC1t01456H Brassica oleracea
BolC9t56081H Brassica oleracea
BraA01t01194Z Brassica rapa
BraA09t38118Z Brassica rapa
C01p15070 Brassica napus
C09p32360 Brassica napus
CAN.G78.154 Capsicum annuum
CANSAT54G0206 Cannabis sativa
CARHR227720 Cardamine hirsuta
CARHR252180 Cardamine hirsuta
Carub.0006s3331 Capsella rubella
Carub.0007s2029 Capsella rubella
Ca_23562_v3 Cicer arietinum L.
Ca_25392_v3 Cicer arietinum L.
CBR_g40874 Chara braunii
Cc00_g15140 Coffea canephora
Cc02_g38850 Coffea canephora
CDE04G0249 Ceratophyllum demersum
Cfa005769 Carpinus fangiana
Cfa006467 Carpinus fangiana
Ciclev10016474m.g Citrus clementina
CiPaw.02G037800 Carya illinoinensis
COL.COLO4_22426 Corchorus olitorius
Cpa.g.sc10.16 Carica papaya
CsaV3_3G008340 Cucumis sativus L.
CSS0045126 Camellia sinensis var. sinensis
DCAR_020830 Daucus carota
Dinv32544 Davidia involucrata
Duzib147G0085 Durio zibethinus
Duzib187G0164 Durio zibethinus
ECA236G4309 Erigeron canadensis
EL10Ac1g00324 Beta vulgaris
FAN05G3773 Fragaria x ananassa
FAN09G2134 Fragaria x ananassa
FvH4_6g03230 Fragaria vesca
FvH4_6g03240 Fragaria vesca
FvH4_6g03270 Fragaria vesca
Glyma.07G060800 Glycine max
Glyma.16G029400 Glycine max
Gohir.A02G138400 Gossypium hirsutum
Gohir.A03G042400 Gossypium hirsutum
Gohir.D03G049000 Gossypium hirsutum
Gohir.D03G125200 Gossypium hirsutum
Gorai.003G050300 Gossypium raimondii
Gorai.003G131400 Gossypium raimondii
HanXRQChr04g0120611 Helianthus annuus
Haze_15607 Corylus avellana
Haze_23551 Corylus avellana
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla
HPP92_025111 Vanilla planifolia
Hund23260 Selenicereus undatus
Lalb_Chr10g0100131 Lupinus albus
Lj3g0026359 Lotus japonicus
Lj9P593T21 Lonicera japonica
Lsat_1_v5_gn_3_52480 Lactuca sativa
Lsat_1_v5_gn_3_52500 Lactuca sativa
Lsat_1_v5_gn_4_144541 Lactuca sativa
Lsat_1_v5_gn_4_144561 Lactuca sativa
Lsat_1_v5_gn_7_1520 Lactuca sativa
Manes.06G055200 Manihot esculenta
Mapoly0007s0267 Marchantia polymorpha
MBI04_g37933_MAGBIO Magnolia biondii
MCO13G369 Micromonas commoda
MD04G1222200 Malus domestica
MD12G1238400 Malus domestica
Medtr8g023960 Medicago truncatula
MELO3C006052.2 Cucumis melo
Migut.B01823 Erythranthe guttata
MSTRG.17312 Avicennia marina
Nitab4.5_0000305g0260 Nicotiana tabacum
Nitab4.5_0004613g0050 Nicotiana tabacum
Nn2g15034 Nelumbo nucifera
Nn3g18457 Nelumbo nucifera
Oeu007833.1 Olea europaea
Oeu063662.1 Olea europaea
Os01g0511200 Oryza sativa ssp. japonica
Peaxi162Scf01012g00238 Petunia axillaris
PGR031G0642 Punica granatum
PGSC0003DMG400000203 Solanum tuberosum
Phvul.010G108400 Phaseolus vulgaris
Potri.011G098000 Populus trichocarpa
Pp3c17_23470 Physcomitrium patens
PRCOL_00005619 Prasinoderma coloniale
Prupe.6G341300 Prunus persica
Psat4g213880 Pisum sativum
PSO339G2746 Papaver somniferum
PSO801G0186 Papaver somniferum
QL04p059766 Quercus lobata
RcHm_v2.0_Chr3g0451651 Rosa chinensis
RcHm_v2.0_Chr3g0451741 Rosa chinensis
Rhsim07G0008000 Rhododendron simsii
Sabra11G0084900 Salix brachista
Sabra11G0091100 Salix brachista
SalBow5G1869 Salvia bowleyana
SalBow6G6433 Salvia bowleyana
Sc26g0000750 Simmondsia chinensis
Sed0001947 Sechium edule
SGA_v2.0_scaffold11G05711 Striga asiatica
Solyc01g095420.3 Solanum lycopersicum
Sopen01g039170 Solanum pennellii
Sp6g03690 Schrenkiella parvula
Sp7g19220 Schrenkiella parvula
TAR369G1106 Trochodendron aralioides
TAR383G0748 Trochodendron aralioides
Thecc.01G121600 Theobroma cacao
Thhalv10026066m.g Eutrema salsugineum
Thhalv10028903m.g Eutrema salsugineum
TPR.G21281 Trifolium pratense
TWI53G0615 Tripterygium wilfordii
unitig_26.g8933 Utricularia gibba
vmacro13205 Vaccinium macrocarpon
VMungo0331G0610 Vigna mungo
Zm00001eb249970 Zea mays

User provided reference genes

Program Settings