Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31820 Brassica napus
A09p08910 Brassica napus
Aa31LG1G16930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3229 Anthoceros agrestis
Actinidia28231 Actinidia chinensis
Actinidia28865 Actinidia chinensis
Ah.03g143560 Amaranthus hybridus
AL8G42500 Arabidopsis lyrata
Aqoxy5G01893 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.UTAL3L Arachis hypogaea
AT5G65000 Arabidopsis thaliana
ATR0118G022 Amborella trichopoda
Atru.chr4.64 Acer truncatum
AUR62002009 Chenopodium quinoa
AUR62003793 Chenopodium quinoa
BcaB02g09851 Brassica carinata
BcaB02g09852 Brassica carinata
BcaB02g09853 Brassica carinata
BcaB04g20002 Brassica carinata
BcaC01g02731 Brassica carinata
BcaC04g23271 Brassica carinata
BolC2t11972H Brassica oleracea
BolC3t18379H Brassica oleracea
BolC9t53935H Brassica oleracea
BraA06t26113Z Brassica rapa
BraA09t36542Z Brassica rapa
C03p61190 Brassica napus
C09p10350 Brassica napus
CAN.G151.30 Capsicum annuum
CANSAT01G1018 Cannabis sativa
CARHR293770 Cardamine hirsuta
Carub.0008s2584 Capsella rubella
Ca_17737_v3 Cicer arietinum L.
CBR_g39403 Chara braunii
Cc07_g15210 Coffea canephora
Cc07_g15220 Coffea canephora
CDE10G0517 Ceratophyllum demersum
Cfa002663 Carpinus fangiana
Ciclev10025805m.g Citrus clementina
CiPaw.04G099500 Carya illinoinensis
ClCG01G018760 Citrullus lanatus
COL.COLO4_09964 Corchorus olitorius
COL.COLO4_30268 Corchorus olitorius
CsaV3_6G045430 Cucumis sativus L.
CSS0022010 Camellia sinensis var. sinensis
CSS0040315 Camellia sinensis var. sinensis
DCAR_014225 Daucus carota
Dinv13188 Davidia involucrata
Dinv21909 Davidia involucrata
Duzib147G0987 Durio zibethinus
Duzib264G0353 Durio zibethinus
ECA232G4987 Erigeron canadensis
EL10Ac6g15104 Beta vulgaris
Eucgr.H04785 Eucalyptus grandis
FAN19G3104 Fragaria x ananassa
FAN23G0829 Fragaria x ananassa
FAN26G1738 Fragaria x ananassa
FAN28G0473 Fragaria x ananassa
FvH4_1g20890 Fragaria vesca
Glyma.08G135800 Glycine max
Gohir.A11G052200 Gossypium hirsutum
Gohir.A11G201400 Gossypium hirsutum
Gohir.D11G055600 Gossypium hirsutum
Gohir.D11G221614 Gossypium hirsutum
Gorai.007G060800 Gossypium raimondii
Gorai.007G238700 Gossypium raimondii
GSVIVG01002467001 Vitis vinifera
HanXRQChr09g0260241 Helianthus annuus
HanXRQChr10g0305351 Helianthus annuus
Haze_24932 Corylus avellana
Hma1.2p1_0047F.1_g027810 Hydrangea macrophylla
HPP92_016352 Vanilla planifolia
Hund16285 Selenicereus undatus
Lalb_Chr07g0185181 Lupinus albus
Lj4A891G48 Lonicera japonica
Lj4g0008298 Lotus japonicus
Lsat_1_v5_gn_4_141261 Lactuca sativa
Manes.12G134900 Manihot esculenta
Mapoly0120s0005 Marchantia polymorpha
MBI05_g19355_MAGBIO Magnolia biondii
MCO05G725 Micromonas commoda
MD01G1029800 Malus domestica
MD15G1324100 Malus domestica
Medtr8g090230 Medicago truncatula
MELO3C007756.2 Cucumis melo
Migut.L00122 Erythranthe guttata
MSTRG.15711 Avicennia marina
Nitab4.5_0000715g0030 Nicotiana tabacum
Nitab4.5_0006967g0030 Nicotiana tabacum
Nn5g30122 Nelumbo nucifera
Oeu002173.1 Olea europaea
Oeu053549.4 Olea europaea
Os02g0573300 Oryza sativa ssp. japonica
Peaxi162Scf00295g01018 Petunia axillaris
PGR102G0026 Punica granatum
PGSC0003DMG400007222 Solanum tuberosum
Phvul.002G256000 Phaseolus vulgaris
Potri.005G075600 Populus trichocarpa
Potri.007G092800 Populus trichocarpa
Pp3c3_32740 Physcomitrium patens
Prupe.6G187000 Prunus persica
Psat7g054880 Pisum sativum
PSO210G6484 Papaver somniferum
PSO447G0182 Papaver somniferum
QL06p049517 Quercus lobata
RcHm_v2.0_Chr2g0113501 Rosa chinensis
RcHm_v2.0_Chr3g0453281 Rosa chinensis
RcHm_v2.0_Chr3g0467111 Rosa chinensis
Rhsim08G0010400 Rhododendron simsii
Sabra05G0062100 Salix brachista
SalBow5G3973 Salvia bowleyana
SalBow5G4805 Salvia bowleyana
Sc16g0005040 Simmondsia chinensis
Sed0019406 Sechium edule
SEGI_29496 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13592 Striga asiatica
SHI29446 Sapria himalayana
SMO169G0194 Selaginella moellendorffii
Solyc05g051590.3 Solanum lycopersicum
Sopen05g030040 Solanum pennellii
Sp2g28080 Schrenkiella parvula
TAR376G0564 Trochodendron aralioides
THA.LOC104798971 Tarenaya hassleriana
Thecc.01G101500 Theobroma cacao
Thhalv10004589m.g Eutrema salsugineum
TPR.G6228 Trifolium pratense
TWI53G1711 Tripterygium wilfordii
TWI77G0214 Tripterygium wilfordii
unitig_32.g10697 Utricularia gibba
vmacro18602 Vaccinium macrocarpon
vmacro18603 Vaccinium macrocarpon
VMungo0251G2060 Vigna mungo
Zm00001eb182830 Zea mays
Zm00001eb244760 Zea mays

User provided reference genes

Program Settings