Gene: Carub.0008s2584
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s2584
- Transcript Identifier Carub.0008s2584.1
- Gene Type Coding gene
- Location scaffold_8 : 12342554-12344727 : negative
Gene Family Information
- ID HOM05D005837
- #Genes/#Species 134/97
- Phylogenetic origin
- ID ORTHO05D007594
- #Genes/#Species 129/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s2584.v1.1
- pacid 39251287
- synonym Carubv10026670m.g
Descriptions
- Description PTHR10231:SF3 - CMP-SIALIC ACID TRANSPORTER 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090481 | IEA | InterPro | pyrimidine nucleotide-sugar transmembrane transport | |
| GO:1902183 | ISO | PLAZA Integrative Orthology | regulation of shoot apical meristem development | AT5G65000 |
| GO:1990569 | ISO | PLAZA Integrative Orthology | UDP-N-acetylglucosamine transmembrane transport | AT5G65000 |
| GO:0010584 | ISO | PLAZA Integrative Orthology | pollen exine formation | AT5G65000 |
| GO:0015789 | ISO | PLAZA Integrative Orthology | UDP-N-acetylgalactosamine transmembrane transport | AT5G65000 |
| GO:1903070 | ISO | PLAZA Integrative Orthology | negative regulation of ER-associated ubiquitin-dependent protein catabolic process | AT5G65000 |
| GO:1903857 | ISO | PLAZA Integrative Orthology | negative regulation of cytokinin dehydrogenase activity | AT5G65000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015165 | IEA | InterPro | pyrimidine nucleotide-sugar transmembrane transporter activity | |
| GO:0005463 | ISO | PLAZA Integrative Orthology | UDP-N-acetylgalactosamine transmembrane transporter activity | AT5G65000 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000139 | IEA | InterPro | Golgi membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G65000 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007271 | Nucleotide-sugar transporter |
| Mapman id | Description |
|---|---|
| 24.2.1.1.9 | Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (ROCK) |