Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p10930 Brassica napus
Aa31LG3G9660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis
Actinidia06134 Actinidia chinensis
Actinidia18663 Actinidia chinensis
Ah.13g070460 Amaranthus hybridus
AL8G28210 Arabidopsis lyrata
Aqoxy6G02259 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea
AT5G53490 Arabidopsis thaliana
ATR0680G157 Amborella trichopoda
Atru.chr12.2262 Acer truncatum
AUR62006065 Chenopodium quinoa
AUR62035562 Chenopodium quinoa
BcaB08g35713 Brassica carinata
BcaC04g20449 Brassica carinata
BolC9t57215H Brassica oleracea
BraA10t43184Z Brassica rapa
C09p43330 Brassica napus
CAN.G481.39 Capsicum annuum
CANSAT21G0464 Cannabis sativa
CARHR266630 Cardamine hirsuta
Carub.0008s1366 Capsella rubella
Ca_16726_v3 Cicer arietinum L.
CBR_g40818 Chara braunii
Cc02_g01260 Coffea canephora
CDE09G0779 Ceratophyllum demersum
Cfa016207 Carpinus fangiana
Ciclev10021983m.g Citrus clementina
CiPaw.06G044600 Carya illinoinensis
ClCG05G009090 Citrullus lanatus
COL.COLO4_06666 Corchorus olitorius
COL.COLO4_16805 Corchorus olitorius
Cpa.g.sc3.109 Carica papaya
Cre09.g404000 Chlamydomonas reinhardtii
CsaV3_3G019700 Cucumis sativus L.
CSS0000669 Camellia sinensis var. sinensis
CSS0046458 Camellia sinensis var. sinensis
DCAR_020339 Daucus carota
Dinv29254 Davidia involucrata
Duzib084G1042 Durio zibethinus
Duzib205G0233 Durio zibethinus
ECA233G1427 Erigeron canadensis
EL10Ac3g05248 Beta vulgaris
Eucgr.K00402 Eucalyptus grandis
FAN01G1435 Fragaria x ananassa
FAN01G3091 Fragaria x ananassa
FAN03G0720 Fragaria x ananassa
FAN06G2446 Fragaria x ananassa
FAN10G0265 Fragaria x ananassa
FAN10G0314 Fragaria x ananassa
FvH4_7g32120 Fragaria vesca
Glyma.04G233500 Glycine max
Glyma.06G131300 Glycine max
Gohir.A05G409400 Gossypium hirsutum
Gohir.A09G185500 Gossypium hirsutum
Gohir.A10G001400 Gossypium hirsutum
Gohir.A11G163501 Gossypium hirsutum
Gohir.A13G227280 Gossypium hirsutum
Gohir.D01G203700 Gossypium hirsutum
Gohir.D02G154600 Gossypium hirsutum
Gohir.D03G118200 Gossypium hirsutum
Gohir.D07G112932 Gossypium hirsutum
Gohir.D09G180400 Gossypium hirsutum
Gohir.D11G247000 Gossypium hirsutum
Gohir.D12G019400 Gossypium hirsutum
Gohir.D12G161000 Gossypium hirsutum
Gorai.004G199200 Gossypium raimondii
Gorai.004G257600 Gossypium raimondii
Gorai.006G202400 Gossypium raimondii
Gorai.007G219400 Gossypium raimondii
Gorai.008G019700 Gossypium raimondii
Gorai.008G174000 Gossypium raimondii
Gorai.013G219100 Gossypium raimondii
GSVIVG01038586001 Vitis vinifera
HanXRQChr08g0225151 Helianthus annuus
Haze_00239 Corylus avellana
Haze_00242 Corylus avellana
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla
HPP92_013004 Vanilla planifolia
Lalb_Chr08g0240071 Lupinus albus
Lj1g0002080 Lotus japonicus
Lj3A899T66 Lonicera japonica
Lsat_1_v5_gn_9_63281 Lactuca sativa
Manes.01G039700 Manihot esculenta
Mapoly0014s0126 Marchantia polymorpha
MBI18_g01156_MAGBIO Magnolia biondii
MD01G1223900 Malus domestica
MD07G1294700 Malus domestica
Medtr3g491890 Medicago truncatula
Medtr7g110630 Medicago truncatula
MELO3C019377.2 Cucumis melo
Migut.F01014 Erythranthe guttata
MSTRG.8527 Avicennia marina
Nitab4.5_0007100g0060 Nicotiana tabacum
Nn3g18931 Nelumbo nucifera
Oeu010700.1 Olea europaea
Oeu055193.1 Olea europaea
Os10g0502000 Oryza sativa ssp. japonica
Peaxi162Scf00740g00233 Petunia axillaris
PGR142G2159 Punica granatum
PGSC0003DMG400018522 Solanum tuberosum
Phvul.009G050400 Phaseolus vulgaris
Potri.012G018100 Populus trichocarpa
Pp3c23_22190 Physcomitrium patens
Prupe.2G314300 Prunus persica
Psat5g075600 Pisum sativum
PSO063G3297 Papaver somniferum
PSO170G4678 Papaver somniferum
QL09p007826 Quercus lobata
RcHm_v2.0_Chr1g0381721 Rosa chinensis
Rhsim09G0206900 Rhododendron simsii
Sabra12G0014400 Salix brachista
SalBow2G0471 Salvia bowleyana
Sc25g0000950 Simmondsia chinensis
Sed0026931 Sechium edule
SEGI_05976 Sequoiadendron giganteum
SEGI_24850 Sequoiadendron giganteum
SGA_v2.0_scaffold125G33711 Striga asiatica
SMO111G0094 Selaginella moellendorffii
Solyc03g082890.3 Solanum lycopersicum
Sopen03g022710 Solanum pennellii
Sp6g15630 Schrenkiella parvula
TAR375G0053 Trochodendron aralioides
THA.LOC104799961 Tarenaya hassleriana
Thecc.03G202400 Theobroma cacao
Thhalv10014535m.g Eutrema salsugineum
TPR.G33655 Trifolium pratense
TWI39G1154 Tripterygium wilfordii
unitig_578.g16672 Utricularia gibba
vmacro10134 Vaccinium macrocarpon
VMungo1309G1177 Vigna mungo
Zm00001eb220820 Zea mays

User provided reference genes

Program Settings