Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22530 Brassica napus
Aa31LG11G12940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis
Actinidia08766 Actinidia chinensis
Ah.10g032150 Amaranthus hybridus
AL6G27690 Arabidopsis lyrata
Aqoxy2G01900 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.86ZX86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DVH85A Arachis hypogaea
AT5G16690 Arabidopsis thaliana
ATR0829G080 Amborella trichopoda
Atru.chr12.1871 Acer truncatum
Atru.chr13.1435 Acer truncatum
AUR62022348 Chenopodium quinoa
AUR62033087 Chenopodium quinoa
AUR62042764 Chenopodium quinoa
BcaB08g36827 Brassica carinata
BolC9t58877H Brassica oleracea
BraA10t44315Z Brassica rapa
C09p60450 Brassica napus
CAN.G103.20 Capsicum annuum
CAN.G1793.1 Capsicum annuum
CAN.G1793.2 Capsicum annuum
CAN.G557.3 Capsicum annuum
CAN.G824.56 Capsicum annuum
CANSAT54G2180 Cannabis sativa
CARHR196510 Cardamine hirsuta
Carub.0006s1489 Capsella rubella
Ca_03104_v3 Cicer arietinum L.
CBR_g52284 Chara braunii
Cc10_g10830 Coffea canephora
CDE02G0417 Ceratophyllum demersum
Cfa016076 Carpinus fangiana
Cfa022750 Carpinus fangiana
Ciclev10032799m.g Citrus clementina
Ciclev10033588m.g Citrus clementina
CiPaw.05G212600 Carya illinoinensis
ClCG01G004810 Citrullus lanatus
COL.COLO4_15131 Corchorus olitorius
COL.COLO4_22344 Corchorus olitorius
COL.COLO4_22345 Corchorus olitorius
COL.COLO4_37046 Corchorus olitorius
Cpa.g.sc43.140 Carica papaya
Cpa.g.sc43.143 Carica papaya
CsaV3_5G005010 Cucumis sativus L.
CSS0036845 Camellia sinensis var. sinensis
DCAR_020431 Daucus carota
Duzib106G1003 Durio zibethinus
ECA232G1869 Erigeron canadensis
ECA233G1554 Erigeron canadensis
EL10Ac2g03131 Beta vulgaris
EL10Ac4g08387 Beta vulgaris
Eucgr.A02992 Eucalyptus grandis
FAN01G2368 Fragaria x ananassa
FAN03G2216 Fragaria x ananassa
FAN10G1332 Fragaria x ananassa
FvH4_7g34260 Fragaria vesca
Glyma.12G014600 Glycine max
Gohir.A02G125300 Gossypium hirsutum
Gohir.D03G055100 Gossypium hirsutum
Gorai.003G057900 Gossypium raimondii
HanXRQChr15g0492741 Helianthus annuus
Haze_00369 Corylus avellana
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla
Hma1.2p1_0419F.1_g149520 Hydrangea macrophylla
HPP92_000954 Vanilla planifolia
Lalb_Chr01g0000771 Lupinus albus
Lalb_Chr01g0000781 Lupinus albus
Lj3A884T57 Lonicera japonica
Lj3A884T58 Lonicera japonica
Lj3g0016493 Lotus japonicus
Lsat_1_v5_gn_9_46201 Lactuca sativa
Manes.08G160700 Manihot esculenta
Mapoly0140s0032 Marchantia polymorpha
MCO08G313 Micromonas commoda
MD01G1239300 Malus domestica
MD07G1032700 Malus domestica
Medtr5g082610 Medicago truncatula
MELO3C005455.2 Cucumis melo
Migut.J00550 Erythranthe guttata
MSTRG.19155 Avicennia marina
Nitab4.5_0010710g0030 Nicotiana tabacum
Nitab4.5_0010710g0040 Nicotiana tabacum
Nitab4.5_0012358g0010 Nicotiana tabacum
Nn3g21157 Nelumbo nucifera
Oeu001352.2 Olea europaea
Oeu046340.1 Olea europaea
Os10g0402200 Oryza sativa ssp. japonica
Peaxi162Scf00046g02624 Petunia axillaris
PGR042G2204 Punica granatum
PGSC0003DMG401015362 Solanum tuberosum
PGSC0003DMG402015362 Solanum tuberosum
Phvul.011G017500 Phaseolus vulgaris
Potri.013G077200 Populus trichocarpa
Pp3c16_7630 Physcomitrium patens
Prupe.2G329300 Prunus persica
Psat5g135040 Pisum sativum
PSO170G6050 Papaver somniferum
PSO210G4891 Papaver somniferum
PSO339G0775 Papaver somniferum
PSO384G2364 Papaver somniferum
QL09p020654 Quercus lobata
RcHm_v2.0_Chr1g0384611 Rosa chinensis
RcHm_v2.0_Chr6g0290011 Rosa chinensis
Rhsim03G0224400 Rhododendron simsii
Rhsim03G0224500 Rhododendron simsii
Sabra13G0066100 Salix brachista
SalBow3G3950 Salvia bowleyana
Sc13g0011020 Simmondsia chinensis
Sed0005542 Sechium edule
SEGI_39455 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24867 Striga asiatica
SHI15005 Sapria himalayana
SHI15006 Sapria himalayana
SMO203G0218 Selaginella moellendorffii
Solyc12g013880.2 Solanum lycopersicum
Sopen12g007200 Solanum pennellii
Sp6g27470 Schrenkiella parvula
TAR365G1018 Trochodendron aralioides
TAR365G1123 Trochodendron aralioides
TAR633G0012 Trochodendron aralioides
THA.LOC104821161 Tarenaya hassleriana
Thecc.05G222900 Theobroma cacao
Thhalv10012783m.g Eutrema salsugineum
TPR.G19809 Trifolium pratense
TWI53G1480 Tripterygium wilfordii
unitig_749.g14271 Utricularia gibba
vmacro06371 Vaccinium macrocarpon
VMungo1127G1342 Vigna mungo
Zm00001eb031810 Zea mays

User provided reference genes

Program Settings