Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p06670 Brassica napus
Aa31sc76G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis
Actinidia29202 Actinidia chinensis
AL1G10030 Arabidopsis lyrata
AL1G13210 Arabidopsis lyrata
AL3G42200 Arabidopsis lyrata
AL4G27190 Arabidopsis lyrata
Aqoxy6G02415 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea
AT2G04560 Arabidopsis thaliana
ATR1128G087 Amborella trichopoda
ATR1128G089 Amborella trichopoda
Atru.chr6.3277 Acer truncatum
Atru.chr6.3292 Acer truncatum
AUR62015110 Chenopodium quinoa
AUR62017573 Chenopodium quinoa
BcaB06g26821 Brassica carinata
BcaC06g35880 Brassica carinata
BolC7t41459H Brassica oleracea
BraA07t28458Z Brassica rapa
C07p10140 Brassica napus
CAN.G290.4 Capsicum annuum
CANSAT64G1164 Cannabis sativa
CARHR102490 Cardamine hirsuta
Carub.0003s2619 Capsella rubella
Ca_23308_v3 Cicer arietinum L.
CBR_g34007 Chara braunii
Cc05_g03680 Coffea canephora
CDE04G1587 Ceratophyllum demersum
Cfa014300 Carpinus fangiana
Ciclev10018214m.g Citrus clementina
CiPaw.04G192600 Carya illinoinensis
ClCG02G018170 Citrullus lanatus
COL.COLO4_04205 Corchorus olitorius
COL.COLO4_04206 Corchorus olitorius
COL.COLO4_35817 Corchorus olitorius
Cpa.g.sc132.41 Carica papaya
CsaV3_6G015560 Cucumis sativus L.
CSS0012074 Camellia sinensis var. sinensis
CSS0040237 Camellia sinensis var. sinensis
DCAR_021128 Daucus carota
Dinv39765 Davidia involucrata
Dinv39766 Davidia involucrata
Dinv39767 Davidia involucrata
Dinv39768 Davidia involucrata
Duzib211G0019 Durio zibethinus
ECA240G1426 Erigeron canadensis
EL10Ac9g22808 Beta vulgaris
Eucgr.K00731 Eucalyptus grandis
FAN02G2441 Fragaria x ananassa
FAN09G4368 Fragaria x ananassa
FAN14G5087 Fragaria x ananassa
FvH4_6g41870 Fragaria vesca
Glyma.02G100600 Glycine max
Gohir.A07G188100 Gossypium hirsutum
Gohir.D07G194900 Gossypium hirsutum
Gorai.001G218100 Gossypium raimondii
GSVIVG01030530001 Vitis vinifera
HanXRQChr14g0429261 Helianthus annuus
HanXRQChr14g0429271 Helianthus annuus
Haze_12748 Corylus avellana
HPP92_010001 Vanilla planifolia
HPP92_010007 Vanilla planifolia
HPP92_015259 Vanilla planifolia
Hund24186 Selenicereus undatus
Lalb_Chr07g0194251 Lupinus albus
Lalb_Chr07g0194261 Lupinus albus
Lj3g0013009 Lotus japonicus
Lsat_1_v5_gn_9_105061 Lactuca sativa
Manes.12G056701 Manihot esculenta
Mapoly0007s0032 Marchantia polymorpha
Mapoly0062s0088 Marchantia polymorpha
MBI15_g22711_MAGBIO Magnolia biondii
MD09G1116800 Malus domestica
MD17G1108300 Malus domestica
Medtr8g012965 Medicago truncatula
MELO3C019719.2 Cucumis melo
Migut.F00824 Erythranthe guttata
MSTRG.9018 Avicennia marina
Nitab4.5_0000130g0280 Nicotiana tabacum
Nitab4.5_0004549g0020 Nicotiana tabacum
Nitab4.5_0008855g0020 Nicotiana tabacum
Nn1g07331 Nelumbo nucifera
Nn4g24376 Nelumbo nucifera
Oeu012678.1 Olea europaea
Os01g0752600 Oryza sativa ssp. japonica
Peaxi162Scf00007g00131 Petunia axillaris
PGR142G3833 Punica granatum
PGSC0003DMG400001079 Solanum tuberosum
Phvul.003G026900 Phaseolus vulgaris
Potri.014G160300 Populus trichocarpa
Pp3c10_3060 Physcomitrium patens
Pp3c10_3220 Physcomitrium patens
Pp3c14_8150 Physcomitrium patens
Pp3c17_14860 Physcomitrium patens
Pp3c1_26240 Physcomitrium patens
Prupe.3G208000 Prunus persica
Psat0s3432g0080 Pisum sativum
Psat4g200320 Pisum sativum
Psat4g200480 Pisum sativum
PSO541G2790 Papaver somniferum
QL08p029973 Quercus lobata
RcHm_v2.0_Chr2g0157701 Rosa chinensis
RcHm_v2.0_Chr2g0157711 Rosa chinensis
Rhsim04G0046700 Rhododendron simsii
Rhsim04G0046900 Rhododendron simsii
Rhsim04G0047300 Rhododendron simsii
Rhsim04G0049100 Rhododendron simsii
Sabra14G0122000 Salix brachista
Sc05g0006280 Simmondsia chinensis
Sed0019308 Sechium edule
SEGI_00664 Sequoiadendron giganteum
SEGI_21918 Sequoiadendron giganteum
SEGI_26033 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27705 Striga asiatica
SMO356G0467 Selaginella moellendorffii
Solyc07g049740.4 Solanum lycopersicum
Sopen07g025360 Solanum pennellii
Sp3g23350 Schrenkiella parvula
TAR629G1527 Trochodendron aralioides
TAR629G2547 Trochodendron aralioides
THA.LOC104826609 Tarenaya hassleriana
Thecc.01G184600 Theobroma cacao
Thhalv10002525m.g Eutrema salsugineum
TPR.G17115 Trifolium pratense
TWI18G1217 Tripterygium wilfordii
unitig_46.g18724 Utricularia gibba
unitig_46.g18725 Utricularia gibba
vmacro09372 Vaccinium macrocarpon
VMungo1127G1618 Vigna mungo
Zm00001eb153480 Zea mays

User provided reference genes

Program Settings