Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23470 Brassica napus
Aa31LG1G29420 Aethionema arabicum
Aa31LG5G6080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis
Actinidia00716 Actinidia chinensis
Actinidia24301 Actinidia chinensis
Actinidia24862 Actinidia chinensis
Ah.08g220410 Amaranthus hybridus
AL2G15220 Arabidopsis lyrata
AL4G25690 Arabidopsis lyrata
AL4G25710 Arabidopsis lyrata
AL4G47600 Arabidopsis lyrata
Aqoxy2G03167 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84DKWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9RSW73 Arachis hypogaea
AT2G30780 Arabidopsis thaliana
AT2G48000 Arabidopsis thaliana
ATR0487G016 Amborella trichopoda
Atru.BG.65.p Acer truncatum
Atru.chr5.1309 Acer truncatum
AUR62037928 Chenopodium quinoa
AUR62043492 Chenopodium quinoa
BcaB02g10341 Brassica carinata
BolC4t23514H Brassica oleracea
BolC4t23515H Brassica oleracea
BolC4t27488H Brassica oleracea
BraA04t17874Z Brassica rapa
C04p19810 Brassica napus
C04p59780 Brassica napus
CAN.G438.46 Capsicum annuum
CANSAT25G1854 Cannabis sativa
CARHR124250 Cardamine hirsuta
CARHR143390 Cardamine hirsuta
Carub.0004s1199 Capsella rubella
Carub.0004s3072 Capsella rubella
Ca_02584_v3 Cicer arietinum L.
Cc01_g19990 Coffea canephora
CDE10G1068 Ceratophyllum demersum
Ciclev10019759m.g Citrus clementina
CiPaw.09G181700 Carya illinoinensis
ClCG00G000230 Citrullus lanatus
ClCG00G000240 Citrullus lanatus
ClCG00G003600 Citrullus lanatus
ClCG10G003500 Citrullus lanatus
COL.COLO4_08057 Corchorus olitorius
Cpa.g.sc731.2 Carica papaya
CsaV3_3G003500 Cucumis sativus L.
CSS0012831 Camellia sinensis var. sinensis
DCAR_002776 Daucus carota
DCAR_005831 Daucus carota
Dinv11278 Davidia involucrata
Dinv32979 Davidia involucrata
ECA234G1745 Erigeron canadensis
EL10Ac7g17159 Beta vulgaris
Eucgr.H01610 Eucalyptus grandis
FAN15G0955 Fragaria x ananassa
FAN20G1843 Fragaria x ananassa
FAN24G2890 Fragaria x ananassa
FAN27G3110 Fragaria x ananassa
FvH4_2g24360 Fragaria vesca
Glyma.03G148400 Glycine max
Glyma.19G151700 Glycine max
Gohir.A08G071400 Gossypium hirsutum
Gohir.D08G079600 Gossypium hirsutum
Gorai.004G084600 Gossypium raimondii
GSVIVG01011040001 Vitis vinifera
HanXRQChr09g0252061 Helianthus annuus
HanXRQChr12g0362741 Helianthus annuus
Haze_04786 Corylus avellana
Hma1.2p1_0209F.1_g089290 Hydrangea macrophylla
HPP92_003166 Vanilla planifolia
Hund05366 Selenicereus undatus
Lalb_Chr17g0335721 Lupinus albus
Lj1g0019119 Lotus japonicus
Lj2C1182T1 Lonicera japonica
Lsat_1_v5_gn_6_117561 Lactuca sativa
Manes.01G212200 Manihot esculenta
Manes.05G070650 Manihot esculenta
Mapoly0072s0009 Marchantia polymorpha
MBI18_g06533_MAGBIO Magnolia biondii
MD03G1273200 Malus domestica
MD11G1295800 Malus domestica
MD11G1295900 Malus domestica
Medtr2g049540 Medicago truncatula
Medtr5g076010 Medicago truncatula
MELO3C014018.2 Cucumis melo
Migut.N02129 Erythranthe guttata
Migut.O00883 Erythranthe guttata
MSTRG.12583 Avicennia marina
Nitab4.5_0000050g0240 Nicotiana tabacum
Nitab4.5_0006715g0010 Nicotiana tabacum
Nitab4.5_0006715g0020 Nicotiana tabacum
Nn5g27607 Nelumbo nucifera
Oeu047904.1 Olea europaea
Os05g0407900 Oryza sativa ssp. japonica
Peaxi162Scf00517g00426 Petunia axillaris
PGSC0003DMG400026158 Solanum tuberosum
Phvul.001G146400 Phaseolus vulgaris
Potri.016G119600 Populus trichocarpa
Pp3c1_37670 Physcomitrium patens
Pp3c2_3210 Physcomitrium patens
Prupe.8G249700 Prunus persica
Psat1g018400 Pisum sativum
PSO302G0009 Papaver somniferum
PSO541G6072 Papaver somniferum
PSO675G7470 Papaver somniferum
QL12p023176 Quercus lobata
RcHm_v2.0_Chr6g0292231 Rosa chinensis
Rhsim01G0278600 Rhododendron simsii
Rhsim13G0020300 Rhododendron simsii
Sabra16G0115500 Salix brachista
SalBow2G0958 Salvia bowleyana
Sc17g0003740 Simmondsia chinensis
Sed0008104 Sechium edule
Sed0017897 Sechium edule
SEGI_28259 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39044 Striga asiatica
SHI15422 Sapria himalayana
Solyc07g053060.3 Solanum lycopersicum
Sopen07g026610 Solanum pennellii
Sp4g13280 Schrenkiella parvula
TAR365G0919 Trochodendron aralioides
TAR636G1825 Trochodendron aralioides
THA.LOC104800814 Tarenaya hassleriana
THA.LOC104817539 Tarenaya hassleriana
Thecc.01G287300 Theobroma cacao
Thhalv10016605m.g Eutrema salsugineum
TPR.G16641 Trifolium pratense
TPR.G17547 Trifolium pratense
TWI14G1024 Tripterygium wilfordii
unitig_21.g20288 Utricularia gibba
vmacro02530 Vaccinium macrocarpon
vmacro14952 Vaccinium macrocarpon
VMungo1383G3055 Vigna mungo
Zm00001eb287820 Zea mays

User provided reference genes

Program Settings