Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00720 Brassica napus
Aa31LG5G7620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis
Actinidia31089 Actinidia chinensis
Actinidia34708 Actinidia chinensis
Ah.04g163640 Amaranthus hybridus
AL4G23090 Arabidopsis lyrata
Aqoxy1G00957 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea
AT2G28600 Arabidopsis thaliana
ATR0820G119 Amborella trichopoda
Atru.chr12.959 Acer truncatum
Atru.chr12.960 Acer truncatum
AUR62041532 Chenopodium quinoa
AUR62041544 Chenopodium quinoa
BcaB04g16965 Brassica carinata
BcaC01g01514 Brassica carinata
BolC3t21576H Brassica oleracea
BraA08t32129Z Brassica rapa
C03p92620 Brassica napus
CAN.G135.64 Capsicum annuum
CANSAT56G0546 Cannabis sativa
CARHR121620 Cardamine hirsuta
CARHR131580 Cardamine hirsuta
Carub.0004s0956 Capsella rubella
Ca_06884_v3 Cicer arietinum L.
Ca_11764_v3 Cicer arietinum L.
CBR_g23342 Chara braunii
Cc02_g10290 Coffea canephora
CDE04G0943 Ceratophyllum demersum
Cfa011218 Carpinus fangiana
Ciclev10031564m.g Citrus clementina
Ciclev10033771m.g Citrus clementina
CiPaw.13G035800 Carya illinoinensis
ClCG08G008080 Citrullus lanatus
COL.COLO4_35597 Corchorus olitorius
Cpa.g.sc720.1 Carica papaya
CsaV3_2G032950 Cucumis sativus L.
CSS0000330 Camellia sinensis var. sinensis
CSS0028406 Camellia sinensis var. sinensis
CSS0040532 Camellia sinensis var. sinensis
DCAR_030749 Daucus carota
Dinv31290 Davidia involucrata
Duzib114G0077 Durio zibethinus
Duzib128G1757 Durio zibethinus
ECA238G2526 Erigeron canadensis
EL10Ac4g08636 Beta vulgaris
Eucgr.G02716 Eucalyptus grandis
Eucgr.G02717 Eucalyptus grandis
FAN01G1973 Fragaria x ananassa
FAN03G0647 Fragaria x ananassa
FAN06G0090 Fragaria x ananassa
FAN10G2875 Fragaria x ananassa
FvH4_7g06330 Fragaria vesca
Glyma.02G165400 Glycine max
Gohir.D10G206700 Gossypium hirsutum
Gorai.011G232200 Gossypium raimondii
Gorai.011G232400 Gossypium raimondii
GSVIVG01034668001 Vitis vinifera
GSVIVG01034722001 Vitis vinifera
GSVIVG01034723001 Vitis vinifera
HanXRQChr06g0169121 Helianthus annuus
HanXRQChr14g0456321 Helianthus annuus
HanXRQChr16g0513241 Helianthus annuus
HanXRQChr17g0553981 Helianthus annuus
Haze_02624 Corylus avellana
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla
HPP92_024384 Vanilla planifolia
Hund06749 Selenicereus undatus
Lalb_Chr03g0036351 Lupinus albus
Lj5g0004167 Lotus japonicus
Lsat_1_v5_gn_2_102781 Lactuca sativa
Lsat_1_v5_gn_7_84341 Lactuca sativa
Manes.07G091866 Manihot esculenta
Mapoly0120s0020 Marchantia polymorpha
MBI17_g30596_MAGBIO Magnolia biondii
MD02G1244900 Malus domestica
MD07G1072000 Malus domestica
Medtr1g050730 Medicago truncatula
MELO3C019880.2 Cucumis melo
Migut.F00917 Erythranthe guttata
Migut.F01660 Erythranthe guttata
MSTRG.409 Avicennia marina
Nitab4.5_0002259g0090 Nicotiana tabacum
Nitab4.5_0010486g0020 Nicotiana tabacum
Nn2g13981 Nelumbo nucifera
Nn6g35073 Nelumbo nucifera
Oeu059850.1 Olea europaea
Os12g0147500 Oryza sativa ssp. japonica
Peaxi162Scf00244g00007 Petunia axillaris
Peaxi162Scf00244g00111 Petunia axillaris
Peaxi162Scf00244g00112 Petunia axillaris
PGR142G1839 Punica granatum
PGSC0003DMG400027344 Solanum tuberosum
Phvul.007G245100 Phaseolus vulgaris
Potri.010G234000 Populus trichocarpa
Pp3c1_25970 Physcomitrium patens
Prupe.2G090100 Prunus persica
Psat6g094520 Pisum sativum
PSO063G1818 Papaver somniferum
PSO170G6466 Papaver somniferum
PSO339G2548 Papaver somniferum
PSO339G3253 Papaver somniferum
PSO384G4559 Papaver somniferum
QL04p040912 Quercus lobata
RcHm_v2.0_Chr1g0334181 Rosa chinensis
Rhsim09G0144200 Rhododendron simsii
RhsimUnG0061600 Rhododendron simsii
Sabra10G0181400 Salix brachista
SalBow4G3335 Salvia bowleyana
SalBow6G0601 Salvia bowleyana
Sc06g0002190 Simmondsia chinensis
Sed0025588 Sechium edule
SEGI_00328 Sequoiadendron giganteum
SEGI_18985 Sequoiadendron giganteum
SEGI_32992 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06508 Striga asiatica
SGA_v2.0_scaffold62G21347 Striga asiatica
Solyc11g007610.2 Solanum lycopersicum
Sopen11g003460 Solanum pennellii
Sp4g11420 Schrenkiella parvula
TAR623G0127 Trochodendron aralioides
THA.LOC104826349 Tarenaya hassleriana
Thecc.10G099000 Theobroma cacao
Thhalv10016555m.g Eutrema salsugineum
TPR.G7613 Trifolium pratense
TWI38G0593 Tripterygium wilfordii
unitig_736.g22320 Utricularia gibba
unitig_899.g14480 Utricularia gibba
vmacro10276 Vaccinium macrocarpon
VMungo0720G2821 Vigna mungo
Zm00001eb086490 Zea mays
Zm00001eb164020 Zea mays
Zm00001eb201540 Zea mays

User provided reference genes

Program Settings