Gene: AT2G28600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G28600
  • Transcript Identifier AT2G28600.1
  • Gene Type Coding gene
  • Location Chr2 : 12251845-12254672 : positive

Gene Family Information

  • ID HOM05D005759
  • #Genes/#Species 135/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G28600.1
  • uniprot Q9SIB5

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Computational description P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 18076 Blast hits to 18074 proteins in 2559 species: Archae - 105; Bacteria - 11263; Metazoa - 1996; Fungi - 1558; Plants - 1139; Viruses - 1; Other Eukaryotes - 2014 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
Gene OntologyATP binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004386
IEA
GOA Databasehelicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated