Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21840 Brassica napus
A09p46850 Brassica napus
Aa31sc27G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3184 Anthoceros agrestis
Actinidia13829 Actinidia chinensis
Actinidia29177 Actinidia chinensis
Ah.05g175740 Amaranthus hybridus
AL5G34880 Arabidopsis lyrata
Aqoxy2G02353 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.879M1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ECZP7J Arachis hypogaea
AT3G53900 Arabidopsis thaliana
ATR0559G328 Amborella trichopoda
Atru.chr8.2067 Acer truncatum
AUR62004273 Chenopodium quinoa
AUR62033384 Chenopodium quinoa
BcaB01g00229 Brassica carinata
BcaB02g07762 Brassica carinata
BcaC08g44651 Brassica carinata
BolC6t37356H Brassica oleracea
BolC8t50518H Brassica oleracea
BraA07t29866Z Brassica rapa
BraA09t40153Z Brassica rapa
C06p21670 Brassica napus
C08p29170 Brassica napus
CAN.G208.27 Capsicum annuum
CAN.G229.30 Capsicum annuum
CANSAT35G0868 Cannabis sativa
CANSAT35G1842 Cannabis sativa
CARHR163810 Cardamine hirsuta
Carub.0005s2048 Capsella rubella
Ca_20080_v3 Cicer arietinum L.
CBR_g17719 Chara braunii
Cc06_g02200 Coffea canephora
CDE04G2966 Ceratophyllum demersum
Cfa017317 Carpinus fangiana
Ciclev10012178m.g Citrus clementina
CiPaw.09G199400 Carya illinoinensis
CiPaw.10G148500 Carya illinoinensis
ClCG04G007800 Citrullus lanatus
COL.COLO4_14723 Corchorus olitorius
Cpa.g.sc56.31 Carica papaya
Cpa.g.sc56.35 Carica papaya
Cpa.g.sc56.36 Carica papaya
Cre11.g467778 Chlamydomonas reinhardtii
CsaV3_4G025430 Cucumis sativus L.
CSS0004316 Camellia sinensis var. sinensis
CSS0015426 Camellia sinensis var. sinensis
CSS0042696 Camellia sinensis var. sinensis
DCAR_012131 Daucus carota
DCAR_028771 Daucus carota
Dinv35555 Davidia involucrata
Dinv37132 Davidia involucrata
Duzib093G1348 Durio zibethinus
Duzib128G0016 Durio zibethinus
ECA236G4371 Erigeron canadensis
EL10Ac1g00952 Beta vulgaris
Eucgr.B02718 Eucalyptus grandis
FAN02G2999 Fragaria x ananassa
FAN05G2836 Fragaria x ananassa
FAN09G1978 Fragaria x ananassa
FAN14G2901 Fragaria x ananassa
FvH4_6g12970 Fragaria vesca
Glyma.01G099700 Glycine max
Glyma.03G069600 Glycine max
Gohir.A09G153300 Gossypium hirsutum
Gohir.D09G149000 Gossypium hirsutum
Gorai.006G170200 Gossypium raimondii
GSVIVG01034092001 Vitis vinifera
HanXRQChr04g0124581 Helianthus annuus
HanXRQChr06g0177411 Helianthus annuus
Haze_20854 Corylus avellana
Haze_20857 Corylus avellana
Hma1.2p1_0766F.1_g215130 Hydrangea macrophylla
HPP92_027961 Vanilla planifolia
Hund16974 Selenicereus undatus
Hund27335 Selenicereus undatus
Lalb_Chr22g0358651 Lupinus albus
Lalb_Chr24g0401021 Lupinus albus
Lj2A88G66 Lonicera japonica
Lj3g0007667 Lotus japonicus
Lsat_1_v5_gn_8_84641 Lactuca sativa
Lsat_1_v5_gn_9_19861 Lactuca sativa
Manes.09G096300 Manihot esculenta
Mapoly0035s0109 Marchantia polymorpha
MBI14_g09010_MAGBIO Magnolia biondii
MCO15G321 Micromonas commoda
MD04G1136300 Malus domestica
MD12G1150800 Malus domestica
Medtr4g020090 Medicago truncatula
MELO3C003165.2 Cucumis melo
Migut.J00280 Erythranthe guttata
Migut.J00281 Erythranthe guttata
MSTRG.5635 Avicennia marina
Nitab4.5_0000362g0060 Nicotiana tabacum
Nitab4.5_0006535g0030 Nicotiana tabacum
Nn2g13495 Nelumbo nucifera
Nn2g13496 Nelumbo nucifera
Oeu001404.1 Olea europaea
Os05g0455700 Oryza sativa ssp. japonica
Peaxi162Scf00318g00510 Petunia axillaris
PGR031G0186 Punica granatum
PGSC0003DMG400008888 Solanum tuberosum
Phvul.010G015300 Phaseolus vulgaris
Potri.006G091000 Populus trichocarpa
Pp3c9_24300 Physcomitrium patens
PRCOL_00001881 Prasinoderma coloniale
Prupe.6G262400 Prunus persica
Psat7g240200 Pisum sativum
PSO339G4903 Papaver somniferum
PSO513G0055 Papaver somniferum
QL07p028744 Quercus lobata
RcHm_v2.0_Chr3g0465081 Rosa chinensis
Rhsim04G0162200 Rhododendron simsii
Sabra06G0068800 Salix brachista
Sc01g0004650 Simmondsia chinensis
Sed0015161 Sechium edule
SGA_v2.0_scaffold75G24970 Striga asiatica
SMO147G0009 Selaginella moellendorffii
Solyc03g063860.1 Solanum lycopersicum
Solyc09g011300.3 Solanum lycopersicum
Sopen09g006020 Solanum pennellii
Sp5g08500 Schrenkiella parvula
TAR636G0229 Trochodendron aralioides
THA.LOC104805616 Tarenaya hassleriana
Thecc.05G031800 Theobroma cacao
Thecc.06G103800 Theobroma cacao
Thhalv10010595m.g Eutrema salsugineum
TPR.G17885 Trifolium pratense
TWI77G0204 Tripterygium wilfordii
unitig_578.g15880 Utricularia gibba
vmacro08634 Vaccinium macrocarpon
VMungo0331G1562 Vigna mungo
Zm00001eb289550 Zea mays
Zm00001eb412190 Zea mays

User provided reference genes

Program Settings