Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22690 Brassica napus
A06p22750 Brassica napus
Aa31LG4G13310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3979 Anthoceros agrestis
Actinidia04785 Actinidia chinensis
Actinidia04786 Actinidia chinensis
Actinidia24269 Actinidia chinensis
Ah.11g047340 Amaranthus hybridus
AL5G20890 Arabidopsis lyrata
Aqoxy3G00578 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06HQ5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6HMAT Arachis hypogaea
AT3G42660 Arabidopsis thaliana
ATR0691G143 Amborella trichopoda
Atru.chr9.636 Acer truncatum
AUR62032150 Chenopodium quinoa
AUR62039684 Chenopodium quinoa
BcaB01g01238 Brassica carinata
BcaC01g02114 Brassica carinata
BolC3t19074H Brassica oleracea
BolC3t19078H Brassica oleracea
BraA06t25353Z Brassica rapa
BraA06t25356Z Brassica rapa
C03p68400 Brassica napus
C03p68460 Brassica napus
CANSAT80G2305 Cannabis sativa
CARHR153710 Cardamine hirsuta
Carub.0005s0880 Capsella rubella
Ca_24664_v3 Cicer arietinum L.
Ca_26377_v3 Cicer arietinum L.
CBR_g19151 Chara braunii
CBR_g19153 Chara braunii
Cc04_g08130 Coffea canephora
CDE01G0371 Ceratophyllum demersum
Cfa019855 Carpinus fangiana
Ciclev10018495m.g Citrus clementina
CiPaw.16G080600 Carya illinoinensis
ClCG06G015370 Citrullus lanatus
COL.COLO4_00339 Corchorus olitorius
Cpa.g.sc3.215 Carica papaya
Cre16.g652950 Chlamydomonas reinhardtii
CsaV3_1G003250 Cucumis sativus L.
CSS0018836 Camellia sinensis var. sinensis
DCAR_014013 Daucus carota
Dinv36820 Davidia involucrata
Dinv38628 Davidia involucrata
Duzib068G1379 Durio zibethinus
Duzib205G0984 Durio zibethinus
ECA232G0673 Erigeron canadensis
EL10Ac5g11198 Beta vulgaris
Eucgr.K02631 Eucalyptus grandis
FAN08G0926 Fragaria x ananassa
FAN13G2659 Fragaria x ananassa
FAN18G3426 Fragaria x ananassa
FvH4_5g13280 Fragaria vesca
Glyma.04G158400 Glycine max
Glyma.06G206800 Glycine max
Gohir.A03G072200 Gossypium hirsutum
Gohir.D03G099000 Gossypium hirsutum
Gorai.003G103900 Gossypium raimondii
GSVIVG01008170001 Vitis vinifera
HanXRQChr16g0501941 Helianthus annuus
Haze_18548 Corylus avellana
Hma1.2p1_0733F.1_g210250 Hydrangea macrophylla
HPP92_020489 Vanilla planifolia
HPP92_020490 Vanilla planifolia
Hund09972 Selenicereus undatus
Lalb_Chr08g0235411 Lupinus albus
Lj1g0015597 Lotus japonicus
Lj5A138T57 Lonicera japonica
Lsat_1_v5_gn_4_112460 Lactuca sativa
Lsat_1_v5_gn_4_12100 Lactuca sativa
Lsat_1_v5_gn_4_132261 Lactuca sativa
Lsat_1_v5_gn_5_133280 Lactuca sativa
Manes.06G080000 Manihot esculenta
Mapoly0112s0022 Marchantia polymorpha
MBI15_g26777_MAGBIO Magnolia biondii
MBI15_g26778_MAGBIO Magnolia biondii
MBI15_g28715_MAGBIO Magnolia biondii
MBI15_g42003_MAGBIO Magnolia biondii
MBI16_g18971_MAGBIO Magnolia biondii
MCO04G151 Micromonas commoda
MD06G1206600 Malus domestica
MD14G1217300 Malus domestica
Medtr2g059200 Medicago truncatula
Medtr2g090685 Medicago truncatula
Medtr7g088250 Medicago truncatula
Medtr8g432590 Medicago truncatula
MELO3C017258.2 Cucumis melo
Migut.D01493 Erythranthe guttata
MSTRG.9576 Avicennia marina
Nitab4.5_0000646g0340 Nicotiana tabacum
Nitab4.5_0002805g0040 Nicotiana tabacum
Nn4g23582 Nelumbo nucifera
Oeu031929.1 Olea europaea
Os09g0241100 Oryza sativa ssp. japonica
Peaxi162Scf00017g03258 Petunia axillaris
Peaxi162Scf00417g01311 Petunia axillaris
Peaxi162Scf00417g01333 Petunia axillaris
PGR044G0409 Punica granatum
PGSC0003DMG400024615 Solanum tuberosum
Phvul.009G204400 Phaseolus vulgaris
Potri.012G065200 Populus trichocarpa
Pp3c26_14490 Physcomitrium patens
PRCOL_00001230 Prasinoderma coloniale
Prupe.5G211000 Prunus persica
Psat1g029000 Pisum sativum
PSO017G2079 Papaver somniferum
PSO478G4609 Papaver somniferum
QL10p021360 Quercus lobata
RcHm_v2.0_Chr7g0183891 Rosa chinensis
Rhsim12G0147200 Rhododendron simsii
Sabra12G0046300 Salix brachista
SalBow1G6140 Salvia bowleyana
Sc04g0003990 Simmondsia chinensis
Sed0011544 Sechium edule
SEGI_19386 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16051 Striga asiatica
SHI19002 Sapria himalayana
SHI19003 Sapria himalayana
SMO201G0059 Selaginella moellendorffii
Solyc03g114690.4 Solanum lycopersicum
Sopen03g033760 Solanum pennellii
Sp5g17930 Schrenkiella parvula
SpUn0079_0020 Schrenkiella parvula
TAR629G3288 Trochodendron aralioides
THA.LOC104804979 Tarenaya hassleriana
Thecc.03G110500 Theobroma cacao
Thhalv10016196m.g Eutrema salsugineum
TPR.G15323 Trifolium pratense
TWI60G0681 Tripterygium wilfordii
TWI81G0191 Tripterygium wilfordii
unitig_578.g15938 Utricularia gibba
vmacro16471 Vaccinium macrocarpon
VMungo1309G2787 Vigna mungo
Zm00001eb308160 Zea mays

User provided reference genes

Program Settings