Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28870 Brassica napus
Aa31LG9G11910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1507 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1922 Anthoceros agrestis
Actinidia03012 Actinidia chinensis
Actinidia38234 Actinidia chinensis
Ah.16g108000 Amaranthus hybridus
AL6G43874 Arabidopsis lyrata
Aqoxy4G03136 Aquilegia oxysepala
Aqoxy4G03141 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea
AT4G10090 Arabidopsis thaliana
Atru.BG.271.p Acer truncatum
Atru.chr12.608 Acer truncatum
AUR62036006 Chenopodium quinoa
AUR62041616 Chenopodium quinoa
BcaB01g01447 Brassica carinata
BcaB04g18418 Brassica carinata
BcaC04g21010 Brassica carinata
BolC9t56500H Brassica oleracea
C09p36690 Brassica napus
CAN.G551.89 Capsicum annuum
CANSAT11G2273 Cannabis sativa
CARHR261110 Cardamine hirsuta
Carub.0006s2866 Capsella rubella
Ca_07421_v3 Cicer arietinum L.
CBR_g23354 Chara braunii
Cc09_g02320 Coffea canephora
CDE04G2944 Ceratophyllum demersum
Cfa001572 Carpinus fangiana
Cfa005598 Carpinus fangiana
Ciclev10032487m.g Citrus clementina
CiPaw.02G177700 Carya illinoinensis
ClCG02G013770 Citrullus lanatus
COL.COLO4_08204 Corchorus olitorius
Cpa.g.c44350 Carica papaya
Cpa.g.sc5360.1 Carica papaya
CsaV3_5G006400 Cucumis sativus L.
CSS0019421 Camellia sinensis var. sinensis
CSS0045417 Camellia sinensis var. sinensis
DCAR_015256 Daucus carota
Dinv25934 Davidia involucrata
Duzib114G0197 Durio zibethinus
ECA233G0150 Erigeron canadensis
EL10Ac2g03532 Beta vulgaris
Eucgr.G02786 Eucalyptus grandis
FAN01G1496 Fragaria x ananassa
FAN01G2008 Fragaria x ananassa
FAN03G2886 Fragaria x ananassa
FAN06G0951 Fragaria x ananassa
FAN06G2416 Fragaria x ananassa
FAN10G0505 Fragaria x ananassa
FvH4_7g20560 Fragaria vesca
Glyma.08G340700 Glycine max
Gohir.A06G179004 Gossypium hirsutum
Gohir.D06G174000 Gossypium hirsutum
Gorai.010G203600 Gossypium raimondii
GSVIVG01032643001 Vitis vinifera
HanXRQChr02g0043631 Helianthus annuus
HanXRQChr08g0219361 Helianthus annuus
HanXRQChr12g0360941 Helianthus annuus
HanXRQChr13g0394111 Helianthus annuus
Haze_16957 Corylus avellana
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla
HPP92_012063 Vanilla planifolia
HPP92_012075 Vanilla planifolia
HPP92_012077 Vanilla planifolia
Hund22450 Selenicereus undatus
Lalb_Chr19g0126251 Lupinus albus
Lj1A926T37 Lonicera japonica
Lj1A928T62 Lonicera japonica
Lj1g0007847 Lotus japonicus
Lsat_1_v5_gn_8_21281 Lactuca sativa
Manes.07G105200 Manihot esculenta
Mapoly0003s0199 Marchantia polymorpha
MBI14_g17793_MAGBIO Magnolia biondii
MCO08G343 Micromonas commoda
MD00G1166800 Malus domestica
MD01G1114500 Malus domestica
MD01G1114600 Malus domestica
MD07G1182600 Malus domestica
Medtr7g047440 Medicago truncatula
Medtr7g050450 Medicago truncatula
Medtr7g451610 Medicago truncatula
Medtr7g451710 Medicago truncatula
MELO3C011718.2 Cucumis melo
Migut.F02013 Erythranthe guttata
MSTRG.9191 Avicennia marina
Nitab4.5_0000575g0020 Nicotiana tabacum
Nitab4.5_0002078g0030 Nicotiana tabacum
Nn2g10602 Nelumbo nucifera
Oeu008278.1 Olea europaea
Oeu008279.1 Olea europaea
Os03g0284000 Oryza sativa ssp. japonica
Peaxi162Scf00170g00413 Petunia axillaris
PGR142G2170 Punica granatum
PGSC0003DMG400002916 Solanum tuberosum
Phvul.008G138600 Phaseolus vulgaris
Potri.008G046400 Populus trichocarpa
Pp3c2_31740 Physcomitrium patens
Prupe.2G221200 Prunus persica
Psat0s9937g0040 Pisum sativum
Psat3g152920 Pisum sativum
Psat3g152960 Pisum sativum
Psat3g153040 Pisum sativum
PSO339G1442 Papaver somniferum
PSO384G5123 Papaver somniferum
PSO713G0026 Papaver somniferum
QL08p057314 Quercus lobata
RcHm_v2.0_Chr1g0364441 Rosa chinensis
Rhsim03G0121300 Rhododendron simsii
Sabra08G0032600 Salix brachista
SalBow4G0159 Salvia bowleyana
Sc20g0002250 Simmondsia chinensis
Sed0006326 Sechium edule
SGA_v2.0_scaffold17G08196 Striga asiatica
SGA_v2.0_scaffold62G21443 Striga asiatica
SMO347G0616 Selaginella moellendorffii
Solyc12g009500.2 Solanum lycopersicum
Sopen12g004500 Solanum pennellii
Sp6g07430 Schrenkiella parvula
TAR623G0755 Trochodendron aralioides
THA.LOC104825722 Tarenaya hassleriana
Thecc.10G064600 Theobroma cacao
Thhalv10028887m.g Eutrema salsugineum
TPR.G10191 Trifolium pratense
TWI38G1168 Tripterygium wilfordii
unitig_37.g12298 Utricularia gibba
unitig_37.g12299 Utricularia gibba
vmacro07099 Vaccinium macrocarpon
VMungo1383G1385 Vigna mungo
VMungo1383G3547 Vigna mungo
Zm00001eb378810 Zea mays

User provided reference genes

Program Settings