Gene: AT4G10090
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G10090
- Transcript Identifier AT4G10090.1
- Gene Type Coding gene
- Location Chr4 : 6305455-6307286 : positive
Gene Family Information
- ID HOM05D005673
- #Genes/#Species 136/94
- Phylogenetic origin
- ID ORTHO05D007081
- #Genes/#Species 134/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G10090.1
- symbol ELP6
- uniprot Q8L9Y2
Descriptions
- Description elongator protein 6
- Computational description elongator protein 6 (ELP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2348 (InterPro:IPR018627); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002098 | IEA | Gene Ontology | tRNA wobble uridine modification | |
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification | |
| GO:0008033 | IEA | GOA Database | tRNA processing | |
| GO:2000024 | IMP | Gene Ontology | regulation of leaf development | 1 |
| GO:0031538 | IMP | Gene Ontology | negative regulation of anthocyanin metabolic process | 1 |
| GO:0008284 | IMP | Gene Ontology | positive regulation of cell population proliferation | 1 |
| GO:0006979 | IMP | Gene Ontology | response to oxidative stress | 1 |
| GO:0010016 | IMP | Gene Ontology | shoot system morphogenesis | 2 |
| GO:0010015 | IMP | Gene Ontology | root morphogenesis | 2 |
| GO:0009926 | IMP | Gene Ontology | auxin polar transport | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016746 | IEA | GOA Database | acyltransferase activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033588 | IEA | GOA Database | elongator holoenzyme complex | |
| GO:0033588 | IDA IBA | Gene Ontology | elongator holoenzyme complex | 3 4 |
| GO:0033588 | IEA | InterPro | elongator holoenzyme complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.5.2.6 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP6 |