Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p25930 Brassica napus
Aa31LG9G9510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2129 Anthoceros agrestis
Actinidia25619 Actinidia chinensis
Actinidia39456 Actinidia chinensis
Ah.09g237260 Amaranthus hybridus
AL6G48490 Arabidopsis lyrata
Aqoxy1G02519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06VRVW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RER6EK Arachis hypogaea
AT4G04955 Arabidopsis thaliana
ATR0680G385 Amborella trichopoda
Atru.chr10.1904 Acer truncatum
AUR62014803 Chenopodium quinoa
AUR62016994 Chenopodium quinoa
BcaB01g01850 Brassica carinata
BcaC04g21348 Brassica carinata
BcaC04g21352 Brassica carinata
BcaC07g39766 Brassica carinata
BolC9t56124H Brassica oleracea
BolC9t56127H Brassica oleracea
BraA09t38162Z Brassica rapa
C09p32840 Brassica napus
C09p32920 Brassica napus
CAN.G1164.15 Capsicum annuum
CANSAT35G0124 Cannabis sativa
CARHR252570 Cardamine hirsuta
Carub.0006s3289 Capsella rubella
Ca_00305_v3 Cicer arietinum L.
CBR_g34175 Chara braunii
Cc02_g13200 Coffea canephora
CDE09G0528 Ceratophyllum demersum
Cfa026875 Carpinus fangiana
Ciclev10014972m.g Citrus clementina
CiPaw.09G058400 Carya illinoinensis
ClCG03G005950 Citrullus lanatus
COL.COLO4_31493 Corchorus olitorius
Cpa.g.sc27.55 Carica papaya
Cre13.g592050 Chlamydomonas reinhardtii
CsaV3_1G012190 Cucumis sativus L.
CSS0005949 Camellia sinensis var. sinensis
DCAR_004080 Daucus carota
Dinv07547 Davidia involucrata
Dinv07548 Davidia involucrata
Duzib192G0381 Durio zibethinus
Duzib235G0954 Durio zibethinus
ECA236G2993 Erigeron canadensis
EL10Ac8g20366 Beta vulgaris
Eucgr.E03116 Eucalyptus grandis
Eucgr.E03117 Eucalyptus grandis
Eucgr.E03319 Eucalyptus grandis
FAN08G0180 Fragaria x ananassa
FAN11G1478 Fragaria x ananassa
FAN16G2869 Fragaria x ananassa
FAN18G0055 Fragaria x ananassa
FAN18G2143 Fragaria x ananassa
FAN21G0121 Fragaria x ananassa
FvH4_3g09410 Fragaria vesca
FvH4_5g20980 Fragaria vesca
FvH4_5g20981 Fragaria vesca
Glyma.13G240500 Glycine max
Glyma.13G240600 Glycine max
Glyma.15G072900 Glycine max
Glyma.15G073000 Glycine max
Gohir.A10G024800 Gossypium hirsutum
Gohir.D10G025500 Gossypium hirsutum
Gorai.011G026800 Gossypium raimondii
HanXRQChr04g0124101 Helianthus annuus
Haze_05742 Corylus avellana
Haze_06486 Corylus avellana
HPP92_014737 Vanilla planifolia
HPP92_014748 Vanilla planifolia
Hund23715 Selenicereus undatus
Lalb_Chr15g0089871 Lupinus albus
Lj1A1206G64 Lonicera japonica
Lj6g0007385 Lotus japonicus
Lsat_1_v5_gn_7_18941 Lactuca sativa
Manes.16G026300 Manihot esculenta
Mapoly0068s0105 Marchantia polymorpha
Mapoly0156s0028 Marchantia polymorpha
MBI18_g16998_MAGBIO Magnolia biondii
MCO09G610 Micromonas commoda
MD00G1095000 Malus domestica
MD05G1314100 Malus domestica
Medtr2g013060 Medicago truncatula
MELO3C002593.2 Cucumis melo
Migut.M01152 Erythranthe guttata
MSTRG.7329 Avicennia marina
Nitab4.5_0002158g0080 Nicotiana tabacum
Nitab4.5_0005954g0030 Nicotiana tabacum
Nn1g06587 Nelumbo nucifera
Os04g0680400 Oryza sativa ssp. japonica
Peaxi162Scf00947g00005 Petunia axillaris
PGR042G2793 Punica granatum
PGSC0003DMG400022386 Solanum tuberosum
Phvul.006G186700 Phaseolus vulgaris
Phvul.006G186800 Phaseolus vulgaris
Potri.004G041800 Populus trichocarpa
Pp3c14_11050 Physcomitrium patens
Pp3c17_10590 Physcomitrium patens
Pp3c2_7120 Physcomitrium patens
PRCOL_00001419 Prasinoderma coloniale
Prupe.4G045000 Prunus persica
Psat1g206560 Pisum sativum
PSO675G5775 Papaver somniferum
QL05p039856 Quercus lobata
RcHm_v2.0_Chr5g0008181 Rosa chinensis
Rhsim02G0010200 Rhododendron simsii
Rhsim02G0011400 Rhododendron simsii
Rhsim02G0128200 Rhododendron simsii
Rhsim06G0021500 Rhododendron simsii
Rhsim10G0197600 Rhododendron simsii
Sabra04G0025900 Salix brachista
Sc05g0007760 Simmondsia chinensis
Sed0013715 Sechium edule
Sed0017986 Sechium edule
SGA_v2.0_scaffold22G09723 Striga asiatica
SHI01971 Sapria himalayana
SMO145G0108 Selaginella moellendorffii
Solyc02g078400.3 Solanum lycopersicum
Sopen02g023260 Solanum pennellii
Sp6g04000 Schrenkiella parvula
TAR626G1957 Trochodendron aralioides
THA.LOC104806286 Tarenaya hassleriana
THA.LOC104812854 Tarenaya hassleriana
Thecc.06G189700 Theobroma cacao
Thhalv10028578m.g Eutrema salsugineum
TPR.G36745 Trifolium pratense
TWI38G1891 Tripterygium wilfordii
unitig_22.g6763 Utricularia gibba
vmacro15902 Vaccinium macrocarpon
VMungo0540G1414 Vigna mungo
VMungo0540G1652 Vigna mungo
Zm00001eb137210 Zea mays
Zm00001eb374970 Zea mays
Zm00001eb433900 Zea mays

User provided reference genes

Program Settings