Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26920 Brassica napus
A09p61060 Brassica napus
Aa31LG4G1220 Aethionema arabicum
Aa31LG7G600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.525 Anthoceros agrestis
Actinidia12402 Actinidia chinensis
Actinidia18436 Actinidia chinensis
Ah.01g015510 Amaranthus hybridus
AL1G28180 Arabidopsis lyrata
AL2G40470 Arabidopsis lyrata
Aqoxy2G00265 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea
AT1G16020 Arabidopsis thaliana
AT1G80910 Arabidopsis thaliana
ATR0021G018 Amborella trichopoda
Atru.chr11.825 Acer truncatum
AUR62035393 Chenopodium quinoa
AUR62036082 Chenopodium quinoa
BcaB02g07240 Brassica carinata
BcaB03g14509 Brassica carinata
BcaC08g45346 Brassica carinata
BolC6t38125H Brassica oleracea
BolC6t38409H Brassica oleracea
BolC6t40376H Brassica oleracea
BolC8t52011H Brassica oleracea
BraA07t30337Z Brassica rapa
BraA09t41479Z Brassica rapa
C05p23900 Brassica napus
C06p29600 Brassica napus
C06p32880 Brassica napus
C06p32890 Brassica napus
C06p53600 Brassica napus
C08p44650 Brassica napus
CAN.G1206.2 Capsicum annuum
CANSAT78G2020 Cannabis sativa
CARHR016520 Cardamine hirsuta
CARHR073550 Cardamine hirsuta
Carub.0001s1582 Capsella rubella
Carub.0002s2663 Capsella rubella
Cc11_g06590 Coffea canephora
CDE05G1068 Ceratophyllum demersum
Cfa015047 Carpinus fangiana
Ciclev10014948m.g Citrus clementina
CiPaw.05G157900 Carya illinoinensis
CiPaw.05G158000 Carya illinoinensis
CiPaw.06G055300 Carya illinoinensis
COL.COLO4_27613 Corchorus olitorius
Cpa.g.sc362.1 Carica papaya
Cre07.g327000 Chlamydomonas reinhardtii
CsaV3_5G014540 Cucumis sativus L.
CSS0031782 Camellia sinensis var. sinensis
DCAR_023531 Daucus carota
DCAR_023564 Daucus carota
Dinv00920 Davidia involucrata
Dinv01894 Davidia involucrata
Dinv26372 Davidia involucrata
Duzib248G0273 Durio zibethinus
Duzib251G0272 Durio zibethinus
ECA234G4226 Erigeron canadensis
EL10Ac9g20842 Beta vulgaris
Eucgr.B02693 Eucalyptus grandis
FAN07G2273 Fragaria x ananassa
FAN17G2396 Fragaria x ananassa
FvH4_4g33280 Fragaria vesca
Glyma.05G240900 Glycine max
Glyma.08G047900 Glycine max
Gohir.A03G112000 Gossypium hirsutum
Gohir.D02G136500 Gossypium hirsutum
Gorai.005G152600 Gossypium raimondii
GSVIVG01011626001 Vitis vinifera
HanXRQChr12g0367381 Helianthus annuus
HanXRQChr17g0565991 Helianthus annuus
Haze_10848 Corylus avellana
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla
HPP92_009689 Vanilla planifolia
Hund07852 Selenicereus undatus
Lalb_Chr14g0362121 Lupinus albus
Lj4g0026003 Lotus japonicus
Lj6C735G0 Lonicera japonica
Lsat_1_v5_gn_1_123601 Lactuca sativa
Lsat_1_v5_gn_2_121941 Lactuca sativa
Lsat_1_v5_gn_4_23420 Lactuca sativa
Lsat_1_v5_gn_7_69840 Lactuca sativa
Manes.15G123300 Manihot esculenta
Mapoly0059s0063 Marchantia polymorpha
MCO11G935 Micromonas commoda
MD13G1018100 Malus domestica
MD16G1016000 Malus domestica
Medtr8g105900 Medicago truncatula
MELO3C019077.2 Cucumis melo
MELO3C026414.2 Cucumis melo
Migut.H02363 Erythranthe guttata
MSTRG.23341 Avicennia marina
Nitab4.5_0000188g0130 Nicotiana tabacum
Nitab4.5_0002337g0070 Nicotiana tabacum
Nn8g41275 Nelumbo nucifera
Oeu036123.1 Olea europaea
Oeu059514.1 Olea europaea
Os08g0427300 Oryza sativa ssp. japonica
Peaxi162Scf00439g00528 Petunia axillaris
PGR004G1106 Punica granatum
Phvul.011G008500 Phaseolus vulgaris
Potri.008G137000 Populus trichocarpa
Pp3c16_7940 Physcomitrium patens
Prupe.7G053000 Prunus persica
Psat4g004560 Pisum sativum
PSO063G5777 Papaver somniferum
PSO782G4204 Papaver somniferum
QL03p037983 Quercus lobata
RcHm_v2.0_Chr4g0442431 Rosa chinensis
Rhsim09G0087900 Rhododendron simsii
Sabra08G0104500 Salix brachista
SalBow3G3602 Salvia bowleyana
Sc14g0006580 Simmondsia chinensis
Sed0000862 Sechium edule
Sed0001111 Sechium edule
SEGI_01999 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31522 Striga asiatica
SHI04292 Sapria himalayana
SMO146G0258 Selaginella moellendorffii
Solyc02g062110.4 Solanum lycopersicum
Sopen02g013060 Solanum pennellii
Sp1g14330 Schrenkiella parvula
Sp5g34830 Schrenkiella parvula
TAR622G0850 Trochodendron aralioides
THA.LOC104814015 Tarenaya hassleriana
Thecc.02G307700 Theobroma cacao
Thhalv10007433m.g Eutrema salsugineum
Thhalv10018445m.g Eutrema salsugineum
TPR.G19250 Trifolium pratense
TWI74G1652 Tripterygium wilfordii
unitig_21.g20969 Utricularia gibba
VMungo0251G0664 Vigna mungo
VMungo1127G0110 Vigna mungo
Zm00001eb179310 Zea mays

User provided reference genes

Program Settings