Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p17720 Brassica napus
Aa31LG1G12530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis
Actinidia03737 Actinidia chinensis
Actinidia24093 Actinidia chinensis
AL8G37130 Arabidopsis lyrata
Aqoxy1G03172 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea
AT5G60540 Arabidopsis thaliana
ATR0115G033 Amborella trichopoda
Atru.chr3.3643 Acer truncatum
AUR62024993 Chenopodium quinoa
AUR62039626 Chenopodium quinoa
BcaB08g36348 Brassica carinata
BcaB08g36349 Brassica carinata
BcaC03g13961 Brassica carinata
BcaC04g19711 Brassica carinata
BolC2t07247H Brassica oleracea
BolC9t58193H Brassica oleracea
BraA02t05718Z Brassica rapa
BraA10t43851Z Brassica rapa
C02p11600 Brassica napus
C09p53180 Brassica napus
CAN.G1001.26 Capsicum annuum
CAN.G631.16 Capsicum annuum
CARHR274200 Cardamine hirsuta
Carub.0008s2123 Capsella rubella
Ca_09130_v3 Cicer arietinum L.
CBR_g31179 Chara braunii
Cc01_g11250 Coffea canephora
Cfa011331 Carpinus fangiana
Cfa022863 Carpinus fangiana
Ciclev10029093m.g Citrus clementina
CiPaw.13G111500 Carya illinoinensis
CiPaw.13G111900 Carya illinoinensis
ClCG02G021090 Citrullus lanatus
Cpa.g.sc216.17 Carica papaya
Cpa.g.sc216.18 Carica papaya
Cre03.g167051 Chlamydomonas reinhardtii
CsaV3_6G013840 Cucumis sativus L.
CSS0039600 Camellia sinensis var. sinensis
DCAR_006056 Daucus carota
Dinv12496 Davidia involucrata
Dinv32759 Davidia involucrata
Duzib150G0959 Durio zibethinus
Duzib170G0435 Durio zibethinus
Duzib170G0739 Durio zibethinus
ECA248G1947 Erigeron canadensis
EL10Ac9g22501 Beta vulgaris
Eucgr.B02489 Eucalyptus grandis
FAN11G2689 Fragaria x ananassa
FAN16G3648 Fragaria x ananassa
FAN21G1883 Fragaria x ananassa
FvH4_3g32570 Fragaria vesca
Glyma.01G116100 Glycine max
Glyma.03G060100 Glycine max
Gohir.A05G074000 Gossypium hirsutum
Gohir.D05G076900 Gossypium hirsutum
Gorai.009G078300 Gossypium raimondii
GSVIVG01025172001 Vitis vinifera
HanXRQChr01g0018371 Helianthus annuus
Haze_23864 Corylus avellana
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla
HPP92_025849 Vanilla planifolia
Lalb_Chr03g0043331 Lupinus albus
Lalb_Chr19g0124481 Lupinus albus
Lj1A190T89 Lonicera japonica
Lj2A1030T57 Lonicera japonica
Lj2A1030T58 Lonicera japonica
Lj3g0018588 Lotus japonicus
Lsat_1_v5_gn_1_65480 Lactuca sativa
Manes.04G022200 Manihot esculenta
Mapoly0081s0077 Marchantia polymorpha
MBI07_g41453_MAGBIO Magnolia biondii
MBI07_g42630_MAGBIO Magnolia biondii
MBI07_g43742_MAGBIO Magnolia biondii
MCO05G014 Micromonas commoda
MD03G1113000 Malus domestica
MD03G1113200 Malus domestica
MD11G1133800 Malus domestica
Medtr4g015590 Medicago truncatula
MELO3C025766.2 Cucumis melo
Migut.D02210 Erythranthe guttata
Migut.D02214 Erythranthe guttata
MSTRG.21131 Avicennia marina
Nitab4.5_0000650g0110 Nicotiana tabacum
Nitab4.5_0006757g0010 Nicotiana tabacum
Nn2g10757 Nelumbo nucifera
Oeu002854.1 Olea europaea
Oeu002855.1 Olea europaea
Oeu059095.1 Olea europaea
Os02g0130100 Oryza sativa ssp. japonica
Peaxi162Scf00270g00108 Petunia axillaris
PGR102G1730 Punica granatum
PGSC0003DMG400008060 Solanum tuberosum
Phvul.010G001900 Phaseolus vulgaris
Potri.009G012700 Populus trichocarpa
Pp3c18_20140 Physcomitrium patens
Pp3c19_5510 Physcomitrium patens
PRCOL_00006457 Prasinoderma coloniale
Prupe.6G100100 Prunus persica
Psat7g245880 Pisum sativum
PSO339G3071 Papaver somniferum
PSO384G4957 Papaver somniferum
QL01p022418 Quercus lobata
RcHm_v2.0_Chr5g0059641 Rosa chinensis
Rhsim06G0101300 Rhododendron simsii
Rhsim13G0093700 Rhododendron simsii
Sabra09G0008500 Salix brachista
SalBow5G2340 Salvia bowleyana
Sc06g0010070 Simmondsia chinensis
Sed0015117 Sechium edule
SEGI_15740 Sequoiadendron giganteum
SGA_v2.0_scaffold97G29210 Striga asiatica
SHI06095 Sapria himalayana
SHI06096 Sapria himalayana
SMO364G0700 Selaginella moellendorffii
Solyc11g069290.2 Solanum lycopersicum
Sopen11g028020 Solanum pennellii
Sp6g22110 Schrenkiella parvula
TAR005G0002 Trochodendron aralioides
TAR633G1751 Trochodendron aralioides
TAR636G0837 Trochodendron aralioides
TAR636G3455 Trochodendron aralioides
THA.LOC104814830 Tarenaya hassleriana
Thecc.09G257100 Theobroma cacao
Thhalv10014160m.g Eutrema salsugineum
TPR.G13337 Trifolium pratense
TWI75G1433 Tripterygium wilfordii
TWI79G0673 Tripterygium wilfordii
unitig_0.g1517 Utricularia gibba
vmacro03191 Vaccinium macrocarpon
VMungo0331G1810 Vigna mungo
Zm00001eb208970 Zea mays

User provided reference genes

Program Settings