Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01790 Brassica napus
A10p33680 Brassica napus
Aa31LG1G22860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5101 Anthoceros agrestis
Actinidia01106 Actinidia chinensis
Actinidia05350 Actinidia chinensis
Ah.07g203360 Amaranthus hybridus
AL6G10950 Arabidopsis lyrata
Aqoxy253s002 Aquilegia oxysepala
Aqoxy4G02650 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KN3063 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUU1LP Arachis hypogaea
AT5G01230 Arabidopsis thaliana
ATR0618G080 Amborella trichopoda
Atru.chr8.2209 Acer truncatum
AUR62002505 Chenopodium quinoa
AUR62023685 Chenopodium quinoa
BcaB07g33172 Brassica carinata
BcaC06g31969 Brassica carinata
BcaC08g43674 Brassica carinata
BcaNung06801 Brassica carinata
BcaNung07270 Brassica carinata
BolC6t36175H Brassica oleracea
BolC9t60191H Brassica oleracea
BraA10t45399Z Brassica rapa
BraSC56t46387Z Brassica rapa
C06p10940 Brassica napus
C09p74590 Brassica napus
CAN.G355.1 Capsicum annuum
CANSAT35G1124 Cannabis sativa
CARHR211570 Cardamine hirsuta
Carub.0001s3488 Capsella rubella
Carub.0006s0065 Capsella rubella
Ca_00331_v3 Cicer arietinum L.
CBR_g57013 Chara braunii
Cc06_g01570 Coffea canephora
CDE02G3714 Ceratophyllum demersum
Cfa017245 Carpinus fangiana
Cfa025346 Carpinus fangiana
Ciclev10012237m.g Citrus clementina
CiPaw.10G154800 Carya illinoinensis
ClCG10G021930 Citrullus lanatus
COL.COLO4_14570 Corchorus olitorius
Cpa.g.sc163.5 Carica papaya
Cre03.g145907 Chlamydomonas reinhardtii
CsaV3_3G034060 Cucumis sativus L.
CSS0004460 Camellia sinensis var. sinensis
CSS0014404 Camellia sinensis var. sinensis
DCAR_028821 Daucus carota
Dinv14536 Davidia involucrata
Dinv37073 Davidia involucrata
Duzib093G0426 Durio zibethinus
Duzib128G1759 Durio zibethinus
ECA236G3070 Erigeron canadensis
EL10Ac3g06189 Beta vulgaris
Eucgr.K02994 Eucalyptus grandis
FAN02G3073 Fragaria x ananassa
FAN05G4535 Fragaria x ananassa
FAN14G4623 Fragaria x ananassa
FAN14G5960 Fragaria x ananassa
FvH4_6g11910 Fragaria vesca
Glyma.13G239701 Glycine max
Glyma.13G239900 Glycine max
Glyma.15G073500 Glycine max
Gohir.A09G163900 Gossypium hirsutum
Gohir.D09G159400 Gossypium hirsutum
Gorai.006G181100 Gossypium raimondii
GSVIVG01033996001 Vitis vinifera
HanXRQChr06g0182301 Helianthus annuus
Haze_20962 Corylus avellana
Haze_26421 Corylus avellana
Hma1.2p1_0763F.1_g214810 Hydrangea macrophylla
HPP92_006987 Vanilla planifolia
HPP92_007012 Vanilla planifolia
HPP92_007013 Vanilla planifolia
Hund22671 Selenicereus undatus
Lalb_Chr07g0193461 Lupinus albus
Lalb_Chr13g0291231 Lupinus albus
Lj3C956T0 Lonicera japonica
Lj6g0003369 Lotus japonicus
Lsat_1_v5_gn_8_99960 Lactuca sativa
Manes.09G103200 Manihot esculenta
Mapoly0067s0013 Marchantia polymorpha
MCO04G259 Micromonas commoda
MD04G1148100 Malus domestica
MD12G1161600 Malus domestica
Medtr2g013490 Medicago truncatula
MELO3C009184.2 Cucumis melo
Migut.L02000 Erythranthe guttata
MSTRG.26801 Avicennia marina
Nitab4.5_0000008g0900 Nicotiana tabacum
Nitab4.5_0000457g0180 Nicotiana tabacum
Nitab4.5_0003567g0070 Nicotiana tabacum
Nitab4.5_0011703g0020 Nicotiana tabacum
Nn2g13636 Nelumbo nucifera
Oeu030523.1 Olea europaea
Os06g0704900 Oryza sativa ssp. japonica
Peaxi162Scf00141g00514 Petunia axillaris
PGR004G2817 Punica granatum
PGSC0003DMG400020316 Solanum tuberosum
Phvul.006G186100 Phaseolus vulgaris
Potri.019G056300 Populus trichocarpa
Pp3c25_10100 Physcomitrium patens
PRCOL_00001629 Prasinoderma coloniale
Prupe.6G272000 Prunus persica
Psat1g205240 Pisum sativum
PSO384G3533 Papaver somniferum
QL07p036011 Quercus lobata
RcHm_v2.0_Chr3g0463651 Rosa chinensis
RcHm_v2.0_Chr5g0026681 Rosa chinensis
Rhsim04G0234500 Rhododendron simsii
Sabra19G0071800 Salix brachista
SalBow4G0847 Salvia bowleyana
SalBow4G2728 Salvia bowleyana
Sc01g0006650 Simmondsia chinensis
Sed0003609 Sechium edule
Sed0006295 Sechium edule
SEGI_34831 Sequoiadendron giganteum
SGA_v2.0_scaffold240G44103 Striga asiatica
SGA_v2.0_scaffold8G04370 Striga asiatica
SMO111G0107 Selaginella moellendorffii
Solyc09g014320.4 Solanum lycopersicum
Sopen09g007180 Solanum pennellii
Sp1g41690 Schrenkiella parvula
TAR369G0617 Trochodendron aralioides
THA.LOC104827044 Tarenaya hassleriana
Thecc.05G020300 Theobroma cacao
Thhalv10014175m.g Eutrema salsugineum
TPR.G29055 Trifolium pratense
TWI74G1464 Tripterygium wilfordii
TWI77G0647 Tripterygium wilfordii
unitig_37.g12666 Utricularia gibba
vmacro08857 Vaccinium macrocarpon
vmacro08858 Vaccinium macrocarpon
VMungo0540G0440 Vigna mungo
Zm00001eb213220 Zea mays
Zm00001eb258110 Zea mays

User provided reference genes

Program Settings