Gene: HPP92_006987
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_006987
- Transcript Identifier Vpl03Ag06987.1
- Gene Type Coding gene
- Location CM028152.1 : 7111586-7151029 : negative
Gene Family Information
- ID HOM05D005640
- #Genes/#Species 137/98
- Phylogenetic origin
- ID ORTHO05D007124
- #Genes/#Species 134/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Vpl03Ag06987.1
- pid KAG0488176.1
Descriptions
- Description Ribosomal RNA large subunit methyltransferase E ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032259 | IEA | InterPro | methylation | |
| GO:0030488 | ISO | PLAZA Integrative Orthology | tRNA methylation | AT5G01230 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G01230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0008175 | ISO | PLAZA Integrative Orthology | tRNA methyltransferase activity | AT5G01230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G01230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.5.7.2.1 | RNA processing.RNA modification.tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.component TRM7 |