Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12230 Brassica napus
A07p13430 Brassica napus
A08p25520 Brassica napus
A10p15820 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis
Actinidia23857 Actinidia chinensis
Actinidia34479 Actinidia chinensis
AL7G45820 Arabidopsis lyrata
Aqoxy1G01288 Aquilegia oxysepala
Aqoxy1G01289 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea
AT5G37055 Arabidopsis thaliana
ATR0304G021 Amborella trichopoda
Atru.chr3.4121 Acer truncatum
Atru.chr3.4122 Acer truncatum
AUR62001872 Chenopodium quinoa
AUR62009671 Chenopodium quinoa
BcaB01g04521 Brassica carinata
BcaB08g36180 Brassica carinata
BcaC02g08205 Brassica carinata
BcaC02g09329 Brassica carinata
BcaC04g19866 Brassica carinata
BcaC05g26847 Brassica carinata
BcaC08g44597 Brassica carinata
BcaC09g51408 Brassica carinata
BcaC09g51457 Brassica carinata
BolC1t05347H Brassica oleracea
BolC3t13878H Brassica oleracea
BolC9t57889H Brassica oleracea
BraA03t10534Z Brassica rapa
BraA10t43643Z Brassica rapa
C01p12950 Brassica napus
C01p13430 Brassica napus
C03p14340 Brassica napus
C04p57300 Brassica napus
C09p50330 Brassica napus
CAN.G354.39 Capsicum annuum
CANSAT54G1076 Cannabis sativa
CARHR272280 Cardamine hirsuta
Carub.0007s3232 Capsella rubella
Ca_15008_v3 Cicer arietinum L.
Ca_15010_v3 Cicer arietinum L.
CBR_g4734 Chara braunii
Cc05_g02510 Coffea canephora
Cc07_g10850 Coffea canephora
CDE02G1786 Ceratophyllum demersum
Cfa011776 Carpinus fangiana
Ciclev10029319m.g Citrus clementina
CiPaw.13G069500 Carya illinoinensis
ClCG02G019260 Citrullus lanatus
COL.COLO4_11152 Corchorus olitorius
Cpa.g.sc2.358 Carica papaya
Cre01.g044000 Chlamydomonas reinhardtii
CsaV3_6G015890 Cucumis sativus L.
CSS0000896 Camellia sinensis var. sinensis
DCAR_004046 Daucus carota
Duzib150G1412 Durio zibethinus
ECA248G0403 Erigeron canadensis
EL10Ac7g15917 Beta vulgaris
Eucgr.B04002 Eucalyptus grandis
FAN11G1428 Fragaria x ananassa
FAN16G0042 Fragaria x ananassa
FAN21G1424 Fragaria x ananassa
FAN25G2299 Fragaria x ananassa
FvH4_3g39740 Fragaria vesca
Glyma.11G164100 Glycine max
Glyma.18G057300 Glycine max
Gohir.A03G025600 Gossypium hirsutum
Gohir.D03G142900 Gossypium hirsutum
Gorai.003G150100 Gossypium raimondii
GSVIVG01033331001 Vitis vinifera
HanXRQChr10g0284941 Helianthus annuus
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla
HPP92_019076 Vanilla planifolia
Lalb_Chr15g0083281 Lupinus albus
Lj6g0005877 Lotus japonicus
Lsat_1_v5_gn_6_47101 Lactuca sativa
Manes.02G211700 Manihot esculenta
Mapoly0066s0110 Marchantia polymorpha
MBI18_g07568_MAGBIO Magnolia biondii
MCO05G013 Micromonas commoda
MD03G1056300 Malus domestica
MD11G1057500 Malus domestica
Medtr3g465690 Medicago truncatula
MELO3C025697.2 Cucumis melo
Migut.H00695 Erythranthe guttata
MSTRG.2645 Avicennia marina
Nitab4.5_0000438g0150 Nicotiana tabacum
Nitab4.5_0003548g0030 Nicotiana tabacum
Nn1g05206 Nelumbo nucifera
Oeu008088.1 Olea europaea
Oeu008095.1 Olea europaea
Oeu059678.1 Olea europaea
Oeu059694.1 Olea europaea
Os03g0367800 Oryza sativa ssp. japonica
Peaxi162Scf00635g00621 Petunia axillaris
PGR102G0278 Punica granatum
PGSC0003DMG400022531 Solanum tuberosum
PGSC0003DMG400046153 Solanum tuberosum
Phvul.006G073900 Phaseolus vulgaris
Potri.013G152600 Populus trichocarpa
Pp3c4_18980 Physcomitrium patens
Prupe.6G048500 Prunus persica
Psat5g026160 Pisum sativum
PSO349G0142 Papaver somniferum
QL01p026260 Quercus lobata
RcHm_v2.0_Chr5g0071621 Rosa chinensis
Rhsim01G0240900 Rhododendron simsii
Sabra02G0153300 Salix brachista
Sabra04G0079400 Salix brachista
Sabra06G0125700 Salix brachista
Sabra06G0178600 Salix brachista
Sabra10G0082900 Salix brachista
Sabra13G0122700 Salix brachista
Sabra16G0029400 Salix brachista
Sabra19G0122200 Salix brachista
Sabra19G0131600 Salix brachista
SalBow1G1570 Salvia bowleyana
Sc21g0005270 Simmondsia chinensis
Sed0015217 Sechium edule
SEGI_31870 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08260 Striga asiatica
SGA_v2.0_scaffold20G09058 Striga asiatica
SMO134G0149 Selaginella moellendorffii
Solyc03g033480.4 Solanum lycopersicum
Sopen03g006230 Solanum pennellii
TAR633G1157 Trochodendron aralioides
THA.LOC104810692 Tarenaya hassleriana
Thecc.09G357600 Theobroma cacao
Thhalv10014837m.g Eutrema salsugineum
TPR.G25706 Trifolium pratense
unitig_899.g14680 Utricularia gibba
vmacro14621 Vaccinium macrocarpon
VMungo0540G1856 Vigna mungo
VMungo1383G2760 Vigna mungo
Zm00001eb195120 Zea mays

User provided reference genes

Program Settings