Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25710 Brassica napus
Aa31LG8G9490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis
Actinidia05473 Actinidia chinensis
Actinidia08453 Actinidia chinensis
AL3G37400 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea
AT3G22990 Arabidopsis thaliana
ATR0665G105 Amborella trichopoda
Atru.chr4.2312 Acer truncatum
AUR62008592 Chenopodium quinoa
AUR62034661 Chenopodium quinoa
BcaB06g26421 Brassica carinata
BcaC05g25996 Brassica carinata
BcaC05g27989 Brassica carinata
BcaC07g39513 Brassica carinata
BolC5t30651H Brassica oleracea
BolC5t32746H Brassica oleracea
BolC8t50179H Brassica oleracea
BraA05t21452Z Brassica rapa
C05p19490 Brassica napus
C05p40000 Brassica napus
C08p25570 Brassica napus
CAN.G749.16 Capsicum annuum
CANSAT78G2185 Cannabis sativa
CARHR098930 Cardamine hirsuta
Carub.0003s2315 Capsella rubella
Ca_01767_v3 Cicer arietinum L.
CBR_g10806 Chara braunii
Cc03_g04530 Coffea canephora
Cc06_g23150 Coffea canephora
Cfa008407 Carpinus fangiana
Ciclev10004932m.g Citrus clementina
CiPaw.01G193100 Carya illinoinensis
ClCG05G004730 Citrullus lanatus
COL.COLO4_13167 Corchorus olitorius
COL.COLO4_26929 Corchorus olitorius
Cpa.g.sc58.3 Carica papaya
CsaV3_3G012740 Cucumis sativus L.
CSS0022244 Camellia sinensis var. sinensis
CSS0045755 Camellia sinensis var. sinensis
CSS0047423 Camellia sinensis var. sinensis
DCAR_030702 Daucus carota
DCAR_030703 Daucus carota
Dinv14070 Davidia involucrata
Dinv44604 Davidia involucrata
Duzib052G1036 Durio zibethinus
Duzib151G0571 Durio zibethinus
ECA240G2677 Erigeron canadensis
EL10Ac8g19543 Beta vulgaris
Eucgr.H03187 Eucalyptus grandis
FAN12G1274 Fragaria x ananassa
FAN17G2264 Fragaria x ananassa
FAN22G1081 Fragaria x ananassa
FvH4_4g01960 Fragaria vesca
Glyma.02G001600 Glycine max
Glyma.10G001900 Glycine max
Gohir.A10G117000 Gossypium hirsutum
Gohir.D10G150300 Gossypium hirsutum
Gorai.011G167300 Gossypium raimondii
GSVIVG01018083001 Vitis vinifera
HanXRQChr13g0423561 Helianthus annuus
Haze_11258 Corylus avellana
HPP92_006286 Vanilla planifolia
HPP92_006288 Vanilla planifolia
Hund21566 Selenicereus undatus
Lalb_Chr01g0020841 Lupinus albus
Lj3A720G71 Lonicera japonica
Lj6g0016373 Lotus japonicus
Lsat_1_v5_gn_3_124080 Lactuca sativa
Manes.03G170700 Manihot esculenta
Manes.15G034800 Manihot esculenta
Mapoly0008s0256 Marchantia polymorpha
MD13G1203000 Malus domestica
MD16G1218200 Malus domestica
Medtr1g041115 Medicago truncatula
MELO3C006485.2 Cucumis melo
Migut.G00397 Erythranthe guttata
Migut.N00227 Erythranthe guttata
MSTRG.24710 Avicennia marina
Nitab4.5_0000941g0050 Nicotiana tabacum
Nitab4.5_0000977g0090 Nicotiana tabacum
Nitab4.5_0003815g0070 Nicotiana tabacum
Nitab4.5_0012347g0010 Nicotiana tabacum
Nn1g02522 Nelumbo nucifera
Nn3g19479 Nelumbo nucifera
Oeu064221.1 Olea europaea
Os07g0609766 Oryza sativa ssp. japonica
Peaxi162Scf00467g00914 Petunia axillaris
Peaxi162Scf00788g00114 Petunia axillaris
PGR004G2878 Punica granatum
PGSC0003DMG400013391 Solanum tuberosum
PGSC0003DMG401006082 Solanum tuberosum
Phvul.007G279400 Phaseolus vulgaris
Potri.008G159900 Populus trichocarpa
Pp3c15_1060 Physcomitrium patens
Pp3c9_410 Physcomitrium patens
Prupe.1G025500 Prunus persica
Psat6g136600 Pisum sativum
Psat6g163360 Pisum sativum
Psat7g122560 Pisum sativum
PSO210G5698 Papaver somniferum
PSO461G0077 Papaver somniferum
QL06p000355 Quercus lobata
RcHm_v2.0_Chr4g0388931 Rosa chinensis
Rhsim02G0032000 Rhododendron simsii
Rhsim04G0195700 Rhododendron simsii
Sabra08G0121800 Salix brachista
Sabra10G0062800 Salix brachista
SalBow3G3314 Salvia bowleyana
SalBow3G4542 Salvia bowleyana
Sc25g0004210 Simmondsia chinensis
Sed0020385 Sechium edule
SEGI_28733 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29757 Striga asiatica
SGA_v2.0_scaffold79G25614 Striga asiatica
SHI00565 Sapria himalayana
SHI00566 Sapria himalayana
SMO230G0018 Selaginella moellendorffii
Solyc03g005310.4 Solanum lycopersicum
Solyc09g083000.3 Solanum lycopersicum
Sopen03g001350 Solanum pennellii
Sopen09g031870 Solanum pennellii
Sp3g20680 Schrenkiella parvula
TAR365G1076 Trochodendron aralioides
TAR365G1190 Trochodendron aralioides
Thecc.04G242000 Theobroma cacao
Thhalv10020692m.g Eutrema salsugineum
TPR.G32768 Trifolium pratense
TWI09G0420 Tripterygium wilfordii
TWI53G0136 Tripterygium wilfordii
unitig_62.g23259 Utricularia gibba
vmacro08393 Vaccinium macrocarpon
vmacro15397 Vaccinium macrocarpon
VMungo0720G2094 Vigna mungo
Zm00001eb183490 Zea mays

User provided reference genes

Program Settings