Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21660 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.3570 Anthoceros agrestis
Actinidia13448 Actinidia chinensis
Actinidia13449 Actinidia chinensis
Actinidia33657 Actinidia chinensis
Actinidia33658 Actinidia chinensis
Ah.14g086310 Amaranthus hybridus
AL7G39430 Arabidopsis lyrata
Aqoxy5G03882 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EWV0WN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRZ00F Arachis hypogaea
AT4G15850 Arabidopsis thaliana
ATR0661G527 Amborella trichopoda
Atru.chr10.1112 Acer truncatum
AUR62027404 Chenopodium quinoa
AUR62031319 Chenopodium quinoa
BcaC09g50276 Brassica carinata
BcaC09g50282 Brassica carinata
BcaNung00240 Brassica carinata
BolC1t02650H Brassica oleracea
BraA01t02075Z Brassica rapa
C01p27020 Brassica napus
CAN.G160.8 Capsicum annuum
CAN.G2122.3 Capsicum annuum
CANSAT35G1600 Cannabis sativa
CARHR290380 Cardamine hirsuta
Carub.0007s2580 Capsella rubella
Ca_18163_v3 Cicer arietinum L.
Cc11_g02850 Coffea canephora
CDE04G2590 Ceratophyllum demersum
CDE11G0998 Ceratophyllum demersum
Cfa000907 Carpinus fangiana
Ciclev10025380m.g Citrus clementina
CiPaw.09G120700 Carya illinoinensis
ClCG01G024830 Citrullus lanatus
COL.COLO4_31019 Corchorus olitorius
Cpa.g.sc17.43 Carica papaya
Cre07.g319750 Chlamydomonas reinhardtii
CsaV3_6G051950 Cucumis sativus L.
CSS0004710 Camellia sinensis var. sinensis
CSS0008572 Camellia sinensis var. sinensis
CSS0035269 Camellia sinensis var. sinensis
CSS0049309 Camellia sinensis var. sinensis
DCAR_003891 Daucus carota
Dinv32216 Davidia involucrata
Duzib192G0463 Durio zibethinus
ECA240G2278 Erigeron canadensis
EL10Ac8g19315 Beta vulgaris
Eucgr.E02430 Eucalyptus grandis
FAN11G3281 Fragaria x ananassa
FAN16G0453 Fragaria x ananassa
FAN16G1390 Fragaria x ananassa
FAN21G1630 Fragaria x ananassa
FAN25G0576 Fragaria x ananassa
FvH4_3g05121 Fragaria vesca
Glyma.08G231300 Glycine max
Glyma.14G114900 Glycine max
Gohir.A05G146500 Gossypium hirsutum
Gohir.D05G149000 Gossypium hirsutum
Gorai.009G153000 Gossypium raimondii
GSVIVG01021538001 Vitis vinifera
HanXRQChr13g0422501 Helianthus annuus
Haze_05648 Corylus avellana
Hma1.2p1_1794F.1_g302670 Hydrangea macrophylla
HPP92_026294 Vanilla planifolia
HPP92_028168 Vanilla planifolia
Hund12175 Selenicereus undatus
Hund17757 Selenicereus undatus
Hund17759 Selenicereus undatus
Lalb_Chr02g0156151 Lupinus albus
Lj2A322G63 Lonicera japonica
Lj2C923G5 Lonicera japonica
Lj2C924T4 Lonicera japonica
Lj4g0007029 Lotus japonicus
Lsat_1_v5_gn_3_121441 Lactuca sativa
Manes.15G124500 Manihot esculenta
Mapoly0054s0099 Marchantia polymorpha
Mapoly0138s0049 Marchantia polymorpha
Mapoly0138s0050 Marchantia polymorpha
Mapoly3797s0001 Marchantia polymorpha
MBI18_g03007_MAGBIO Magnolia biondii
MD05G1280500 Malus domestica
Medtr5g077690 Medicago truncatula
Medtr8g079462 Medicago truncatula
MELO3C007111.2 Cucumis melo
Migut.M00885 Erythranthe guttata
Migut.M01879 Erythranthe guttata
MSTRG.16261 Avicennia marina
Nitab4.5_0002611g0120 Nicotiana tabacum
Nitab4.5_0003551g0060 Nicotiana tabacum
Nn3g20454 Nelumbo nucifera
Oeu008947.1 Olea europaea
Oeu040093.1 Olea europaea
Oeu054930.1 Olea europaea
Oeu054932.1 Olea europaea
Os02g0795900 Oryza sativa ssp. japonica
Peaxi162Scf00401g00029 Petunia axillaris
PGR031G1497 Punica granatum
PGR031G2076 Punica granatum
PGR035G0006 Punica granatum
PGSC0003DMG400022975 Solanum tuberosum
PGSC0003DMG401011204 Solanum tuberosum
Phvul.002G179500 Phaseolus vulgaris
Potri.004G158000 Populus trichocarpa
Pp3c6_13920 Physcomitrium patens
Prupe.4G084900 Prunus persica
Psat7g080400 Pisum sativum
PSO339G4780 Papaver somniferum
PSO384G1189 Papaver somniferum
PSO541G2802 Papaver somniferum
PSO675G8008 Papaver somniferum
QL05p055424 Quercus lobata
RcHm_v2.0_Chr5g0014641 Rosa chinensis
RcHm_v2.0_Chr5g0014661 Rosa chinensis
RcHm_v2.0_Chr5g0014671 Rosa chinensis
Rhsim11G0051300 Rhododendron simsii
Rhsim13G0117000 Rhododendron simsii
Sc05g0006010 Simmondsia chinensis
Sed0009662 Sechium edule
SEGI_23194 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00200 Striga asiatica
SGA_v2.0_scaffold58G20438 Striga asiatica
SHI38399 Sapria himalayana
SMO139G0134 Selaginella moellendorffii
Solyc07g005890.3 Solanum lycopersicum
Sopen07g002020 Solanum pennellii
Sp7g14250 Schrenkiella parvula
TAR626G1087 Trochodendron aralioides
THA.LOC104802575 Tarenaya hassleriana
Thecc.06G145300 Theobroma cacao
Thhalv10024904m.g Eutrema salsugineum
TPR.G9554 Trifolium pratense
TWI73G0487 Tripterygium wilfordii
vmacro03355 Vaccinium macrocarpon
vmacro03436 Vaccinium macrocarpon
VMungo0251G3629 Vigna mungo
Zm00001eb192420 Zea mays
Zm00001eb257820 Zea mays

User provided reference genes

Program Settings