Gene: AT4G15850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15850
  • Transcript Identifier AT4G15850.1
  • Gene Type Coding gene
  • Location Chr4 : 9001426-9004534 : positive

Gene Family Information

  • ID HOM05D005567
  • #Genes/#Species 138/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15850.1
  • symbol RH1
  • Alias ATRH1,RNA helicase 1
  • uniprot Q7FGZ2

Descriptions

  • Description RNA helicase 1
  • Computational description RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
Gene OntologyRNA helicase activity
GO:0017151
TAS
Gene OntologyDEAD/H-box RNA helicase binding1
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated