Gene: AT4G15850
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G15850
- Transcript Identifier AT4G15850.1
- Gene Type Coding gene
- Location Chr4 : 9001426-9004534 : positive
Gene Family Information
- ID HOM05D005567
- #Genes/#Species 138/93
- Phylogenetic origin
- ID ORTHO05D005651
- #Genes/#Species 154/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G15850.1
- symbol RH1
- Alias ATRH1,RNA helicase 1
- uniprot Q7FGZ2
Descriptions
- Description RNA helicase 1
- Computational description RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003724 | IEA | Gene Ontology | RNA helicase activity | |
GO:0017151 | TAS | Gene Ontology | DEAD/H-box RNA helicase binding | 1 |
GO:0003723 | IEA | GOA Database | RNA binding | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0004386 | IEA | GOA Database | helicase activity | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 2 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |