Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08880 Brassica napus
A08p32640 Brassica napus
Aa31LG1G1950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.842 Anthoceros agrestis
Actinidia02022 Actinidia chinensis
Actinidia14546 Actinidia chinensis
Actinidia14808 Actinidia chinensis
Actinidia27393 Actinidia chinensis
Ah.12g057290 Amaranthus hybridus
AL1G24290 Arabidopsis lyrata
AL1G24430 Arabidopsis lyrata
Aqoxy5G04022 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8RU08H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H32RIC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SR6UK4 Arachis hypogaea
AT1G12800 Arabidopsis thaliana
ATR0680G084 Amborella trichopoda
Atru.chr9.204 Acer truncatum
AUR62010607 Chenopodium quinoa
AUR62017248 Chenopodium quinoa
BcaC03g13296 Brassica carinata
BcaC05g25112 Brassica carinata
BcaC05g25155 Brassica carinata
BcaC05g27952 Brassica carinata
BolC5t29796H Brassica oleracea
BolC5t32696H Brassica oleracea
BolC8t49191H Brassica oleracea
BraA06t24082Z Brassica rapa
C05p10500 Brassica napus
C05p39560 Brassica napus
C08p15640 Brassica napus
CAN.G792.89 Capsicum annuum
CANSAT21G2631 Cannabis sativa
CARHR013110 Cardamine hirsuta
Carub.0001s1252 Capsella rubella
Ca_17550_v3 Cicer arietinum L.
Cc08_g14350 Coffea canephora
CDE05G3632 Ceratophyllum demersum
CDE08G0014 Ceratophyllum demersum
Cfa012142 Carpinus fangiana
Ciclev10024399m.g Citrus clementina
CiPaw.12G095300 Carya illinoinensis
ClCG01G002940 Citrullus lanatus
COL.COLO4_34426 Corchorus olitorius
Cpa.g.sc76.12 Carica papaya
Cpa.g.sc76.19 Carica papaya
Cpa.g.sc76.21 Carica papaya
CsaV3_5G003020 Cucumis sativus L.
CSS0022681 Camellia sinensis var. sinensis
CSS0044378 Camellia sinensis var. sinensis
DCAR_004649 Daucus carota
DCAR_008409 Daucus carota
Dinv38972 Davidia involucrata
Duzib084G0536 Durio zibethinus
Duzib205G0430 Durio zibethinus
ECA233G5767 Erigeron canadensis
ECA233G6007 Erigeron canadensis
ECA246G0114 Erigeron canadensis
EL10Ac5g12770 Beta vulgaris
Eucgr.D01874 Eucalyptus grandis
FAN04G1912 Fragaria x ananassa
FAN08G2943 Fragaria x ananassa
FAN13G1151 Fragaria x ananassa
FAN18G1004 Fragaria x ananassa
FvH4_5g01950 Fragaria vesca
Glyma.05G205651 Glycine max
Glyma.05G205700 Glycine max
Glyma.06G293800 Glycine max
Glyma.08G012600 Glycine max
Glyma.12G133450 Glycine max
Gohir.A12G226600 Gossypium hirsutum
Gohir.D12G229000 Gossypium hirsutum
Gorai.008G245200 Gossypium raimondii
GSVIVG01019806001 Vitis vinifera
HanXRQChr02g0048911 Helianthus annuus
HanXRQChr06g0165791 Helianthus annuus
Haze_08893 Corylus avellana
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla
HPP92_014799 Vanilla planifolia
HPP92_014800 Vanilla planifolia
Hund11490 Selenicereus undatus
Lalb_Chr09g0333291 Lupinus albus
Lj2A187T86 Lonicera japonica
Lj4g0021136 Lotus japonicus
Lsat_1_v5_gn_3_7621 Lactuca sativa
Lsat_1_v5_gn_6_5820 Lactuca sativa
Manes.02G024200 Manihot esculenta
Mapoly0023s0130 Marchantia polymorpha
MBI17_g08175_MAGBIO Magnolia biondii
MD06G1077900 Malus domestica
MD14G1098600 Malus domestica
MD14G1098700 Malus domestica
Medtr8g097290 Medicago truncatula
MELO3C005651.2 Cucumis melo
Migut.A00792 Erythranthe guttata
MSTRG.11999 Avicennia marina
Nitab4.5_0001200g0190 Nicotiana tabacum
Nitab4.5_0004032g0020 Nicotiana tabacum
Nn6g33532 Nelumbo nucifera
Oeu049553.1 Olea europaea
Os02g0115600 Oryza sativa ssp. japonica
Peaxi162Scf00102g01550 Petunia axillaris
PGR031G0987 Punica granatum
Phvul.002G287600 Phaseolus vulgaris
Potri.003G124200 Populus trichocarpa
Pp3c15_23440 Physcomitrium patens
Pp3c9_24810 Physcomitrium patens
Prupe.5G095700 Prunus persica
Psat7g035520 Pisum sativum
PSO063G1293 Papaver somniferum
PSO782G1537 Papaver somniferum
QL12p018066 Quercus lobata
RcHm_v2.0_Chr7g0198431 Rosa chinensis
Rhsim02G0223600 Rhododendron simsii
Sabra03G0087800 Salix brachista
SalBow5G3774 Salvia bowleyana
SalBow6G1897 Salvia bowleyana
Sc22g0000210 Simmondsia chinensis
Sed0016580 Sechium edule
SEGI_27473 Sequoiadendron giganteum
SEGI_37726 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45116 Striga asiatica
Solyc08g007950.3 Solanum lycopersicum
Sopen08g003840 Solanum pennellii
Sp1g11360 Schrenkiella parvula
TAR629G1018 Trochodendron aralioides
THA.LOC104809401 Tarenaya hassleriana
THA.LOC104809657 Tarenaya hassleriana
Thecc.03G275300 Theobroma cacao
Thhalv10006889m.g Eutrema salsugineum
TPR.G12738 Trifolium pratense
TWI81G0928 Tripterygium wilfordii
unitig_744.g24358 Utricularia gibba
vmacro11305 Vaccinium macrocarpon
VMungo0251G1600 Vigna mungo
Zm00001eb007100 Zea mays
Zm00001eb229900 Zea mays
Zm00001eb393320 Zea mays

User provided reference genes

Program Settings