Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19610 Brassica napus
Aa31LG9G12500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4410 Anthoceros agrestis
Actinidia17061 Actinidia chinensis
Ah.11g041760 Amaranthus hybridus
AL8G19220 Arabidopsis lyrata
AL8G19230 Arabidopsis lyrata
Aqoxy5G00977 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NG9QQJ Arachis hypogaea
AT5G42350 Arabidopsis thaliana
AT5G42360 Arabidopsis thaliana
ATR0807G210 Amborella trichopoda
Atru.chr13.102 Acer truncatum
Atru.chr13.103 Acer truncatum
AUR62035143 Chenopodium quinoa
AUR62042576 Chenopodium quinoa
AUR62042579 Chenopodium quinoa
BcaB07g31083 Brassica carinata
BcaC04g22001 Brassica carinata
BcaNung05251 Brassica carinata
BolC9t55390H Brassica oleracea
BraA09t37572Z Brassica rapa
C09p24980 Brassica napus
CAN.G311.134 Capsicum annuum
CANSAT78G2155 Cannabis sativa
CARHR284980 Cardamine hirsuta
CARHR284990 Cardamine hirsuta
Carub.0008s0680 Capsella rubella
Ca_15401_v3 Cicer arietinum L.
Cc10_g00480 Coffea canephora
CDE05G2424 Ceratophyllum demersum
Cfa014114 Carpinus fangiana
Ciclev10000678m.g Citrus clementina
Ciclev10009595m.g Citrus clementina
CiPaw.07G135900 Carya illinoinensis
ClCG08G009280 Citrullus lanatus
COL.COLO4_35541 Corchorus olitorius
Cpa.g.sc26.163 Carica papaya
CsaV3_6G031410 Cucumis sativus L.
CSS0019163 Camellia sinensis var. sinensis
CSS0027936 Camellia sinensis var. sinensis
DCAR_016786 Daucus carota
Dinv31967 Davidia involucrata
Duzib041G0482 Durio zibethinus
Duzib093G0247 Durio zibethinus
Duzib116G0146 Durio zibethinus
ECA232G0027 Erigeron canadensis
ECA238G1647 Erigeron canadensis
EL10Ac1g01911 Beta vulgaris
Eucgr.F01790 Eucalyptus grandis
FAN04G1314 Fragaria x ananassa
FAN08G1213 Fragaria x ananassa
FAN13G3253 Fragaria x ananassa
FAN18G1577 Fragaria x ananassa
FvH4_5g25640 Fragaria vesca
Glyma.04G016300 Glycine max
Glyma.06G016400 Glycine max
Gohir.A01G103500 Gossypium hirsutum
Gohir.D01G088800 Gossypium hirsutum
Gorai.002G114500 Gossypium raimondii
GSVIVG01013397001 Vitis vinifera
HanXRQChr05g0144831 Helianthus annuus
HanXRQChr06g0185211 Helianthus annuus
HanXRQChr15g0492491 Helianthus annuus
Haze_22832 Corylus avellana
Lalb_Chr11g0061481 Lupinus albus
Lalb_Chr23g0265661 Lupinus albus
Lj1g0007073 Lotus japonicus
Lj4C7T6 Lonicera japonica
Lsat_1_v5_gn_2_1901 Lactuca sativa
Lsat_1_v5_gn_9_45721 Lactuca sativa
Manes.05G124800 Manihot esculenta
Mapoly0034s0062 Marchantia polymorpha
Mapoly0107s0031 Marchantia polymorpha
Mapoly1710s0002 Marchantia polymorpha
MBI05_g33302_MAGBIO Magnolia biondii
MD00G1113700 Malus domestica
MD06G1007100 Malus domestica
Medtr1g096890 Medicago truncatula
Medtr3g032780 Medicago truncatula
Medtr3g032830 Medicago truncatula
Medtr3g115870 Medicago truncatula
MELO3C026526.2 Cucumis melo
Migut.N02971 Erythranthe guttata
MSTRG.22092 Avicennia marina
MSTRG.992 Avicennia marina
Nitab4.5_0000383g0380 Nicotiana tabacum
Nitab4.5_0001208g0070 Nicotiana tabacum
Nitab4.5_0009646g0070 Nicotiana tabacum
Nn5g31005 Nelumbo nucifera
Oeu016877.1 Olea europaea
Oeu026110.1 Olea europaea
Os09g0555300 Oryza sativa ssp. japonica
Peaxi162Scf00680g00110 Petunia axillaris
PGR083G0762 Punica granatum
PGSC0003DMG400009989 Solanum tuberosum
Phvul.009G012500 Phaseolus vulgaris
Potri.002G007700 Populus trichocarpa
Potri.005G253500 Populus trichocarpa
Prupe.1G085800 Prunus persica
Prupe.5G009000 Prunus persica
Psat5g009720 Pisum sativum
PSO170G1066 Papaver somniferum
PSO210G6209 Papaver somniferum
QL02p015136 Quercus lobata
RcHm_v2.0_Chr7g0215931 Rosa chinensis
Rhsim06G0005100 Rhododendron simsii
Sabra02G0006100 Salix brachista
Sabra05G0196600 Salix brachista
SalBow1G8439 Salvia bowleyana
SalBow6G7068 Salvia bowleyana
SalBow7G4605 Salvia bowleyana
Sc02g0009190 Simmondsia chinensis
Sc15g0004190 Simmondsia chinensis
Sc15g0004200 Simmondsia chinensis
Sed0010562 Sechium edule
SEGI_19604 Sequoiadendron giganteum
SEGI_32322 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19641 Striga asiatica
SMO270G0041 Selaginella moellendorffii
Solyc04g082580.3 Solanum lycopersicum
Sopen04g036210 Solanum pennellii
Sp7g08210 Schrenkiella parvula
TAR376G0177 Trochodendron aralioides
TAR376G1058 Trochodendron aralioides
THA.LOC104801947 Tarenaya hassleriana
Thecc.08G062600 Theobroma cacao
Thhalv10003171m.g Eutrema salsugineum
TPR.G26790 Trifolium pratense
TPR.G28384 Trifolium pratense
TPR.G38189 Trifolium pratense
TWI36G1622 Tripterygium wilfordii
TWI56G0057 Tripterygium wilfordii
unitig_22.g5815 Utricularia gibba
vmacro21786 Vaccinium macrocarpon
VMungo1080G0280 Vigna mungo
VMungo1309G3038 Vigna mungo
Zm00001eb320670 Zea mays

User provided reference genes

Program Settings