Gene: AT5G42360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G42360
  • Transcript Identifier AT5G42360.1
  • Gene Type Coding gene
  • Location Chr5 : 16936305-16937996 : negative

Gene Family Information

  • ID HOM05D005561
  • #Genes/#Species 138/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G42360.1
  • Alias CFK2,COP9 SIGNALOSOME INTERACTING F-BOX KELCH 2
  • uniprot Q9FII1

Descriptions

  • Description Galactose oxidase/kelch repeat superfamily protein
  • Computational description Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G42350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0001558
ISO
PLAZA Integrative Orthologyregulation of cell growth AT5G42350
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size AT5G42350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0019005
IBA
Gene OntologySCF ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR006652 Kelch repeat type 1
IPR015915 Kelch-type beta propeller
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated