Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13810 Brassica napus
Aa31LG2G890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis
Actinidia02000 Actinidia chinensis
Actinidia02001 Actinidia chinensis
Actinidia14567 Actinidia chinensis
Actinidia37487 Actinidia chinensis
Ah.10g034840 Amaranthus hybridus
AL2G11550 Arabidopsis lyrata
Aqoxy7G00299 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C4WXPV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CVD0A8 Arachis hypogaea
AT1G63680 Arabidopsis thaliana
ATR0680G162 Amborella trichopoda
Atru.chr9.2175 Acer truncatum
AUR62003173 Chenopodium quinoa
AUR62007990 Chenopodium quinoa
BcaB04g18522 Brassica carinata
BcaB06g26524 Brassica carinata
BcaB07g30213 Brassica carinata
BcaB07g31556 Brassica carinata
BcaC04g22690 Brassica carinata
BcaC06g33105 Brassica carinata
BolC9t54561H Brassica oleracea
BraA09t37033Z Brassica rapa
C09p16520 Brassica napus
CAN.G20.10 Capsicum annuum
CAN.G774.53 Capsicum annuum
CANSAT21G2493 Cannabis sativa
CARHR047660 Cardamine hirsuta
Carub.0002s0117 Capsella rubella
Ca_17525_v3 Cicer arietinum L.
CBR_g32224 Chara braunii
Cc08_g14820 Coffea canephora
CDE05G1777 Ceratophyllum demersum
Cfa012222 Carpinus fangiana
Ciclev10018956m.g Citrus clementina
CiPaw.12G092300 Carya illinoinensis
ClCG01G002630 Citrullus lanatus
COL.COLO4_34475 Corchorus olitorius
Cpa.g.sc74.56 Carica papaya
Cre12.g519900 Chlamydomonas reinhardtii
CsaV3_5G002730 Cucumis sativus L.
CSS0006848 Camellia sinensis var. sinensis
CSS0044545 Camellia sinensis var. sinensis
DCAR_000617 Daucus carota
Dinv38934 Davidia involucrata
Duzib205G0518 Durio zibethinus
ECA246G2370 Erigeron canadensis
EL10Ac6g14928 Beta vulgaris
Eucgr.D01840 Eucalyptus grandis
FAN04G0002 Fragaria x ananassa
FAN08G3292 Fragaria x ananassa
FAN13G2706 Fragaria x ananassa
FAN18G3000 Fragaria x ananassa
FvH4_5g02610 Fragaria vesca
Glyma.05G208600 Glycine max
Glyma.05G208921 Glycine max
Glyma.08G015200 Glycine max
Gohir.A03G016800 Gossypium hirsutum
Gohir.A12G229900 Gossypium hirsutum
Gohir.D03G151100 Gossypium hirsutum
Gohir.D12G231000 Gossypium hirsutum
Gorai.003G158300 Gossypium raimondii
Gorai.008G247200 Gossypium raimondii
GSVIVG01019746001 Vitis vinifera
HanXRQChr06g0165871 Helianthus annuus
Haze_08788 Corylus avellana
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla
HPP92_008492 Vanilla planifolia
HPP92_008493 Vanilla planifolia
HPP92_008494 Vanilla planifolia
HPP92_014728 Vanilla planifolia
HPP92_020853 Vanilla planifolia
Hund14815 Selenicereus undatus
Lalb_Chr05g0224711 Lupinus albus
Lj2C0T8 Lonicera japonica
Lj2C0T9 Lonicera japonica
Lj2C185T6 Lonicera japonica
Lj4g0004686 Lotus japonicus
Lsat_1_v5_gn_3_6620 Lactuca sativa
Manes.02G019800 Manihot esculenta
Mapoly0091s0082 Marchantia polymorpha
MBI18_g45367_MAGBIO Magnolia biondii
MCO12G378 Micromonas commoda
MD06G1085100 Malus domestica
MD13G1126200 Malus domestica
MD14G1106100 Malus domestica
MD14G1106200 Malus domestica
MD14G1106300 Malus domestica
Medtr8g098345 Medicago truncatula
MELO3C005683.2 Cucumis melo
Migut.E01089 Erythranthe guttata
MSTRG.13839 Avicennia marina
Nitab4.5_0001615g0110 Nicotiana tabacum
Nitab4.5_0010813g0010 Nicotiana tabacum
Nn6g33413 Nelumbo nucifera
Oeu007749.1 Olea europaea
Oeu051505.1 Olea europaea
Oeu064085.1 Olea europaea
Os10g0548900 Oryza sativa ssp. japonica
Peaxi162Scf00119g01015 Petunia axillaris
PGR031G2745 Punica granatum
PGSC0003DMG400022682 Solanum tuberosum
PGSC0003DMG402012338 Solanum tuberosum
Phvul.002G290300 Phaseolus vulgaris
Potri.001G103300 Populus trichocarpa
Pp3c23_15810 Physcomitrium patens
Pp3c24_18820 Physcomitrium patens
Pp3c3_2590 Physcomitrium patens
Pp3c5_9920 Physcomitrium patens
PRCOL_00002248 Prasinoderma coloniale
Prupe.5G101100 Prunus persica
Psat7g032760 Pisum sativum
PSO478G3044 Papaver somniferum
PSO782G1990 Papaver somniferum
QL12p032791 Quercus lobata
RcHm_v2.0_Chr7g0197491 Rosa chinensis
Sabra01G0078000 Salix brachista
SalBow1G4020 Salvia bowleyana
Sc01g0009640 Simmondsia chinensis
Sed0016596 Sechium edule
SEGI_34096 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35937 Striga asiatica
SMO147G0132 Selaginella moellendorffii
Solyc08g081170.4 Solanum lycopersicum
Sopen08g029470 Solanum pennellii
Sp2g00970 Schrenkiella parvula
TAR375G0921 Trochodendron aralioides
THA.LOC104823588 Tarenaya hassleriana
Thecc.03G279900 Theobroma cacao
Thhalv10023292m.g Eutrema salsugineum
TPR.G12960 Trifolium pratense
TWI15G0555 Tripterygium wilfordii
unitig_26.g9706 Utricularia gibba
vmacro11364 Vaccinium macrocarpon
VMungo0251G0638 Vigna mungo
Zm00001eb391750 Zea mays

User provided reference genes

Program Settings