Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11070 Brassica napus
Aa31LG9G17310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis
Actinidia39198 Actinidia chinensis
Ah.10g037980 Amaranthus hybridus
AL7G46750 Arabidopsis lyrata
Aqoxy3G00138 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea
AT5G37850 Arabidopsis thaliana
ATR0686G023 Amborella trichopoda
Atru.BG.179.p Acer truncatum
Atru.chr4.1672 Acer truncatum
Atru.chr4.2426 Acer truncatum
AUR62023196 Chenopodium quinoa
AUR62023244 Chenopodium quinoa
BcaB06g27151 Brassica carinata
BcaC02g09619 Brassica carinata
BolC4t26053H Brassica oleracea
BraA04t16769Z Brassica rapa
C04p44790 Brassica napus
CAN.G625.83 Capsicum annuum
CANSAT78G2033 Cannabis sativa
CARHR214890 Cardamine hirsuta
Carub.0007s3304 Capsella rubella
Ca_05867_v3 Cicer arietinum L.
CBR_g12736 Chara braunii
Cc07_g08210 Coffea canephora
CDE04G3097 Ceratophyllum demersum
CDE06G0494 Ceratophyllum demersum
Cfa007847 Carpinus fangiana
Cfa022314 Carpinus fangiana
Ciclev10012086m.g Citrus clementina
CiPaw.03G067900 Carya illinoinensis
ClCG05G010900 Citrullus lanatus
COL.COLO4_15705 Corchorus olitorius
Cpa.g.sc116.24 Carica papaya
Cpa.g.sc116.26 Carica papaya
Cre03.g173800 Chlamydomonas reinhardtii
CsaV3_3G021680 Cucumis sativus L.
CSS0010845 Camellia sinensis var. sinensis
DCAR_025877 Daucus carota
Dinv14871 Davidia involucrata
Dinv19006 Davidia involucrata
Duzib133G1255 Durio zibethinus
Duzib138G0816 Durio zibethinus
ECA232G3523 Erigeron canadensis
EL10Ac2g04488 Beta vulgaris
Eucgr.F02818 Eucalyptus grandis
FAN23G2620 Fragaria x ananassa
FAN26G0473 Fragaria x ananassa
FAN26G3341 Fragaria x ananassa
FAN28G0493 Fragaria x ananassa
FvH4_1g24900 Fragaria vesca
Glyma.11G218700 Glycine max
Glyma.18G038600 Glycine max
Gohir.A11G161800 Gossypium hirsutum
Gohir.D11G168100 Gossypium hirsutum
Gorai.007G179400 Gossypium raimondii
GSVIVG01030869001 Vitis vinifera
Haze_14219 Corylus avellana
Haze_26639 Corylus avellana
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla
HPP92_024102 Vanilla planifolia
HPP92_024131 Vanilla planifolia
Hund16202 Selenicereus undatus
Hund16203 Selenicereus undatus
Lalb_Chr18g0053271 Lupinus albus
Lj4A178T43 Lonicera japonica
LjContig00141g0003223 Lotus japonicus
Lsat_1_v5_gn_0_4201 Lactuca sativa
Lsat_1_v5_gn_4_154720 Lactuca sativa
Manes.07G054300 Manihot esculenta
Mapoly0043s0025 Marchantia polymorpha
MBI16_g05922_MAGBIO Magnolia biondii
MCO05G093 Micromonas commoda
MD12G1075700 Malus domestica
Medtr5g079730 Medicago truncatula
MELO3C020384.2 Cucumis melo
MELO3C031731.2 Cucumis melo
Migut.H00263 Erythranthe guttata
Migut.H00866 Erythranthe guttata
MSTRG.23613 Avicennia marina
Nitab4.5_0002248g0040 Nicotiana tabacum
Nitab4.5_0004399g0070 Nicotiana tabacum
Nn3g18202 Nelumbo nucifera
Nn3g18203 Nelumbo nucifera
Nn4g24119 Nelumbo nucifera
Oeu030810.1 Olea europaea
Os12g0600400 Oryza sativa ssp. japonica
Peaxi162Scf00803g00528 Petunia axillaris
PGR004G0611 Punica granatum
Phvul.001G232200 Phaseolus vulgaris
Potri.017G129000 Populus trichocarpa
Pp3c11_8570 Physcomitrium patens
Pp3c7_20600 Physcomitrium patens
PRCOL_00006483 Prasinoderma coloniale
Prupe.3G158100 Prunus persica
Psat2g040920 Pisum sativum
PSO017G2970 Papaver somniferum
PSO478G5258 Papaver somniferum
QL11p004195 Quercus lobata
RcHm_v2.0_Chr2g0122561 Rosa chinensis
Rhsim08G0085100 Rhododendron simsii
Sabra17G0107500 Salix brachista
SalBow3G0445 Salvia bowleyana
SalBow3G4194 Salvia bowleyana
Sc14g0004860 Simmondsia chinensis
Sed0009967 Sechium edule
Sed0014193 Sechium edule
Sed0017329 Sechium edule
Sed0021451 Sechium edule
SEGI_01535 Sequoiadendron giganteum
SEGI_04261 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18144 Striga asiatica
SGA_v2.0_scaffold6G03270 Striga asiatica
SHI09489 Sapria himalayana
SHI09501 Sapria himalayana
SHI09520 Sapria himalayana
SHI09525 Sapria himalayana
SMO117G0213 Selaginella moellendorffii
Solyc02g091340.4 Solanum lycopersicum
Sopen02g035960 Solanum pennellii
Sp7g04170 Schrenkiella parvula
TAR629G0151 Trochodendron aralioides
THA.LOC104822414 Tarenaya hassleriana
Thecc.04G122100 Theobroma cacao
Thhalv10027854m.g Eutrema salsugineum
TPR.G3482 Trifolium pratense
TWI77G0639 Tripterygium wilfordii
unitig_0.g2608 Utricularia gibba
unitig_748.g8492 Utricularia gibba
vmacro18057 Vaccinium macrocarpon
VMungo1383G3344 Vigna mungo
Zm00001eb135500 Zea mays

User provided reference genes

Program Settings