Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p53440 Brassica napus
Aa31LG6G4400 Aethionema arabicum
Actinidia02324 Actinidia chinensis
Actinidia26871 Actinidia chinensis
Ah.09g234310 Amaranthus hybridus
AL7G31310 Arabidopsis lyrata
AL7G31320 Arabidopsis lyrata
AL7G31780 Arabidopsis lyrata
AL8G44690 Arabidopsis lyrata
Aqoxy1G04149 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GWT3TM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9A2AP Arachis hypogaea
AT1G18773 Arabidopsis thaliana
AT4G22300 Arabidopsis thaliana
AT4G22305 Arabidopsis thaliana
ATR0390G001 Amborella trichopoda
ATR1128G032 Amborella trichopoda
AUR62012779 Chenopodium quinoa
AUR62021877 Chenopodium quinoa
BcaNung01697 Brassica carinata
BcaNung02504 Brassica carinata
BcaNung02505 Brassica carinata
BolC7t45679H Brassica oleracea
BraA03t14410Z Brassica rapa
C07p51770 Brassica napus
CAN.G1186.18 Capsicum annuum
CANSAT56G1404 Cannabis sativa
CANSAT56G4535 Cannabis sativa
CARHR229200 Cardamine hirsuta
CARHR229210 Cardamine hirsuta
Carub.0007s1900 Capsella rubella
Carub.0007s1901 Capsella rubella
Ca_21050_v3 Cicer arietinum L.
Ca_28707_v3 Cicer arietinum L.
Cc09_g00990 Coffea canephora
CDE04G2569 Ceratophyllum demersum
CDE07G1265 Ceratophyllum demersum
Cfa000120 Carpinus fangiana
Cfa027170 Carpinus fangiana
Ciclev10016375m.g Citrus clementina
CiPaw.10G076700 Carya illinoinensis
ClCG01G021550 Citrullus lanatus
COL.COLO4_31864 Corchorus olitorius
Cpa.g.sc152.65 Carica papaya
CsaV3_6G048570 Cucumis sativus L.
CSS0037266 Camellia sinensis var. sinensis
DCAR_030878 Daucus carota
Dinv13958 Davidia involucrata
Duzib235G0675 Durio zibethinus
ECA248G2494 Erigeron canadensis
EL10Ac8g20170 Beta vulgaris
Eucgr.D01386 Eucalyptus grandis
FAN21G0894 Fragaria x ananassa
FAN25G0965 Fragaria x ananassa
FvH4_3g01110 Fragaria vesca
Glyma.07G264900 Glycine max
Glyma.07G264950 Glycine max
Glyma.17G009100 Glycine max
Gohir.A05G173400 Gossypium hirsutum
Gohir.D05G176400 Gossypium hirsutum
Gorai.009G181800 Gossypium raimondii
GSVIVG01002096001 Vitis vinifera
GSVIVG01007237001 Vitis vinifera
HanXRQChr01g0006671 Helianthus annuus
HanXRQChr01g0006681 Helianthus annuus
HanXRQChr01g0006701 Helianthus annuus
Haze_06901 Corylus avellana
HPP92_004758 Vanilla planifolia
Hund21156 Selenicereus undatus
Lalb_Chr15g0087911 Lupinus albus
Lalb_Chr15g0087921 Lupinus albus
Lalb_Chr15g0087931 Lupinus albus
Lj1A1238T62 Lonicera japonica
Lj4g0026553 Lotus japonicus
Lj5g0008711 Lotus japonicus
Lsat_1_v5_gn_0_40241 Lactuca sativa
Manes.16G001400 Manihot esculenta
Mapoly0191s0010 Marchantia polymorpha
MCO05G339 Micromonas commoda
MCO13G631 Micromonas commoda
MD05G1356600 Malus domestica
MD10G1329700 Malus domestica
Medtr4g132890 Medicago truncatula
MELO3C007429.2 Cucumis melo
Migut.M01382 Erythranthe guttata
MSTRG.7174 Avicennia marina
Nitab4.5_0000143g0380 Nicotiana tabacum
Nitab4.5_0001198g0200 Nicotiana tabacum
Nn1g07332 Nelumbo nucifera
Nn3g19792 Nelumbo nucifera
Oeu003172.1 Olea europaea
Oeu049726.1 Olea europaea
Os04g0669500 Oryza sativa ssp. japonica
Os04g0669600 Oryza sativa ssp. japonica
Os04g0669700 Oryza sativa ssp. japonica
Peaxi162Scf00558g00217 Petunia axillaris
PGR004G2776 Punica granatum
PGSC0003DMG400013339 Solanum tuberosum
Phvul.003G083000 Phaseolus vulgaris
Potri.004G001701 Populus trichocarpa
Potri.011G023000 Populus trichocarpa
Pp3c15_7880 Physcomitrium patens
PRCOL_00003009 Prasinoderma coloniale
PRCOL_00004932 Prasinoderma coloniale
Prupe.4G012400 Prunus persica
Psat4g003480 Pisum sativum
PSO541G4654 Papaver somniferum
PSO675G5657 Papaver somniferum
QL03p008473 Quercus lobata
QL03p008514 Quercus lobata
QL10p003478 Quercus lobata
QL10p003542 Quercus lobata
QL10p003559 Quercus lobata
RcHm_v2.0_Chr5g0001681 Rosa chinensis
Rhsim13G0147900 Rhododendron simsii
Sabra11G0014000 Salix brachista
SalBow8G0359 Salvia bowleyana
Sc17g0007680 Simmondsia chinensis
Sed0027431 Sechium edule
SEGI_30686 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03770 Striga asiatica
Solyc11g012070.3 Solanum lycopersicum
Sopen11g006860 Solanum pennellii
Sp7g20420 Schrenkiella parvula
TAR624G1052 Trochodendron aralioides
THA.LOC104812987 Tarenaya hassleriana
Thecc.06G231500 Theobroma cacao
Thhalv10011887m.g Eutrema salsugineum
Thhalv10023148m.g Eutrema salsugineum
Thhalv10025978m.g Eutrema salsugineum
TPR.G36996 Trifolium pratense
TWI38G1545 Tripterygium wilfordii
unitig_37.g12163 Utricularia gibba
vmacro03653 Vaccinium macrocarpon
vmacro03840 Vaccinium macrocarpon
VMungo1215G2369 Vigna mungo
Zm00001eb066850 Zea mays
Zm00001eb066860 Zea mays
Zm00001eb433300 Zea mays

User provided reference genes

Program Settings