Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07040 Brassica napus
Aa31LG11G2310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis
Actinidia02691 Actinidia chinensis
Actinidia02692 Actinidia chinensis
Actinidia31365 Actinidia chinensis
Actinidia34689 Actinidia chinensis
Ah.07g201420 Amaranthus hybridus
AL7G20880 Arabidopsis lyrata
Aqoxy4G02032 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea
AT4G31200 Arabidopsis thaliana
ATR0686G036 Amborella trichopoda
ATR0686G209 Amborella trichopoda
ATR1145G067 Amborella trichopoda
ATR1145G079 Amborella trichopoda
Atru.chr7.2702 Acer truncatum
Atru.chr7.2703 Acer truncatum
AUR62007421 Chenopodium quinoa
AUR62027311 Chenopodium quinoa
BcaC09g51902 Brassica carinata
BolC1t00765H Brassica oleracea
BraA01t00656Z Brassica rapa
C01p07790 Brassica napus
CAN.G423.39 Capsicum annuum
CAN.G841.12 Capsicum annuum
CANSAT21G0937 Cannabis sativa
CANSAT25G2351 Cannabis sativa
CARHR239100 Cardamine hirsuta
Carub.0007s0934 Capsella rubella
Ca_09096_v3 Cicer arietinum L.
CBR_g44445 Chara braunii
Cc03_g10050 Coffea canephora
CDE06G0583 Ceratophyllum demersum
CDE06G2039 Ceratophyllum demersum
CDE07G1638 Ceratophyllum demersum
Cfa013295 Carpinus fangiana
Ciclev10014516m.g Citrus clementina
CiPaw.07G210700 Carya illinoinensis
ClCG05G026390 Citrullus lanatus
COL.COLO4_18647 Corchorus olitorius
Cpa.g.sc81.17 Carica papaya
Cre04.g222300 Chlamydomonas reinhardtii
CsaV3_5G010440 Cucumis sativus L.
CSS0031635 Camellia sinensis var. sinensis
CSS0032846 Camellia sinensis var. sinensis
DCAR_027476 Daucus carota
Dinv37487 Davidia involucrata
Dinv38802 Davidia involucrata
Duzib168G0441 Durio zibethinus
ECA234G2010 Erigeron canadensis
EL10Ac5g11907 Beta vulgaris
Eucgr.H04509 Eucalyptus grandis
FAN15G0681 Fragaria x ananassa
FAN20G1701 Fragaria x ananassa
FAN27G2128 Fragaria x ananassa
FvH4_2g36600 Fragaria vesca
Glyma.12G151100 Glycine max
Glyma.17G079400 Glycine max
Gohir.A06G108200 Gossypium hirsutum
Gorai.010G125400 Gossypium raimondii
GSVIVG01014608001 Vitis vinifera
GSVIVG01029743001 Vitis vinifera
HanXRQChr03g0093821 Helianthus annuus
Haze_21772 Corylus avellana
Haze_21773 Corylus avellana
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla
HPP92_005904 Vanilla planifolia
Hund14329 Selenicereus undatus
Lalb_Chr25g0287701 Lupinus albus
Lj1g0000151 Lotus japonicus
Lj3A264G15 Lonicera japonica
Lsat_1_v5_gn_4_32681 Lactuca sativa
Manes.03G000300 Manihot esculenta
Mapoly0058s0003 Marchantia polymorpha
MBI02_g34313_MAGBIO Magnolia biondii
MD08G1126000 Malus domestica
MD15G1105800 Malus domestica
Medtr1g092770 Medicago truncatula
MELO3C003615.2 Cucumis melo
MELO3C018377.2 Cucumis melo
Migut.H02336 Erythranthe guttata
MSTRG.966 Avicennia marina
Nitab4.5_0000167g0180 Nicotiana tabacum
Nitab4.5_0000365g0090 Nicotiana tabacum
Nitab4.5_0001579g0070 Nicotiana tabacum
Nitab4.5_0001801g0060 Nicotiana tabacum
Nitab4.5_0013218g0030 Nicotiana tabacum
Nn1g03658 Nelumbo nucifera
Oeu001428.2 Olea europaea
Oeu009791.1 Olea europaea
Oeu018783.1 Olea europaea
Os06g0682700 Oryza sativa ssp. japonica
Peaxi162Scf00096g01112 Petunia axillaris
Peaxi162Scf01013g00235 Petunia axillaris
PGR142G1479 Punica granatum
PGSC0003DMG400027627 Solanum tuberosum
PGSC0003DMG400028246 Solanum tuberosum
Phvul.001G199500 Phaseolus vulgaris
Potri.006G279800 Populus trichocarpa
Potri.018G002000 Populus trichocarpa
Pp3c17_14220 Physcomitrium patens
PRCOL_00003511 Prasinoderma coloniale
Prupe.1G457600 Prunus persica
Psat5g176520 Pisum sativum
Psat6g134200 Pisum sativum
PSO541G5250 Papaver somniferum
QL12p025629 Quercus lobata
RcHm_v2.0_Chr6g0305221 Rosa chinensis
Rhsim04G0157200 Rhododendron simsii
Sabra06G0216800 Salix brachista
Sabra06G0216900 Salix brachista
Sabra18G0005200 Salix brachista
Sc03g0008920 Simmondsia chinensis
Sc03g0008950 Simmondsia chinensis
Sc03g0008960 Simmondsia chinensis
Sed0022409 Sechium edule
SEGI_09992 Sequoiadendron giganteum
SGA_v2.0_scaffold188G40311 Striga asiatica
SHI01952 Sapria himalayana
SMO147G0244 Selaginella moellendorffii
Solyc10g083200.2 Solanum lycopersicum
Sopen10g032680 Solanum pennellii
Sp7g29080 Schrenkiella parvula
TAR624G0177 Trochodendron aralioides
THA.LOC104819918 Tarenaya hassleriana
Thecc.09G000500 Theobroma cacao
Thhalv10024645m.g Eutrema salsugineum
TPR.G32311 Trifolium pratense
TWI32G1116 Tripterygium wilfordii
TWI34G0645 Tripterygium wilfordii
unitig_32.g11169 Utricularia gibba
unitig_748.g7741 Utricularia gibba
vmacro03505 Vaccinium macrocarpon
VMungo1383G0863 Vigna mungo
VMungo1383G1052 Vigna mungo
Zm00001eb273620 Zea mays

User provided reference genes

Program Settings