Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p44860 Brassica napus
A09p23180 Brassica napus
Aa31sc219G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1611 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis
Actinidia11906 Actinidia chinensis
Actinidia39254 Actinidia chinensis
Ah.11g043160 Amaranthus hybridus
AL8G10270 Arabidopsis lyrata
Aqoxy1G04259 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea
AT5G47680 Arabidopsis thaliana
ATR0751G138 Amborella trichopoda
Atru.chr1.2258 Acer truncatum
AUR62033011 Chenopodium quinoa
AUR62034063 Chenopodium quinoa
BcaB07g30764 Brassica carinata
BcaC04g21607 Brassica carinata
BcaC06g31350 Brassica carinata
BcaC06g34232 Brassica carinata
BolC7t43675H Brassica oleracea
BolC9t55855H Brassica oleracea
BraA06t27358Z Brassica rapa
BraA09t37921Z Brassica rapa
C07p31340 Brassica napus
C09p29920 Brassica napus
CAN.G1156.21 Capsicum annuum
CANSAT56G4202 Cannabis sativa
CARHR173630 Cardamine hirsuta
Carub.0008s0010 Capsella rubella
Ca_00763_v3 Cicer arietinum L.
CBR_g3993 Chara braunii
Cc09_g00320 Coffea canephora
CDE05G0023 Ceratophyllum demersum
CDE05G0194 Ceratophyllum demersum
Cfa000035 Carpinus fangiana
Cfa025804 Carpinus fangiana
Ciclev10015889m.g Citrus clementina
CiPaw.10G081900 Carya illinoinensis
ClCG01G010900 Citrullus lanatus
COL.COLO4_31918 Corchorus olitorius
Cpa.g.sc27.228 Carica papaya
Cre02.g119350 Chlamydomonas reinhardtii
Cre06.g278500 Chlamydomonas reinhardtii
Cre10.g456851 Chlamydomonas reinhardtii
CsaV3_1G015560 Cucumis sativus L.
CSS0047473 Camellia sinensis var. sinensis
DCAR_006316 Daucus carota
Dinv02850 Davidia involucrata
Dinv15338 Davidia involucrata
Duzib160G0837 Durio zibethinus
Duzib192G0504 Durio zibethinus
ECA232G3574 Erigeron canadensis
EL10Ac8g19414 Beta vulgaris
Eucgr.E03858 Eucalyptus grandis
FAN19G1729 Fragaria x ananassa
FAN23G1811 Fragaria x ananassa
FAN28G0158 Fragaria x ananassa
FvH4_1g24140 Fragaria vesca
Glyma.09G014500 Glycine max
Glyma.15G120100 Glycine max
Gohir.A05G175500 Gossypium hirsutum
Gohir.D05G178600 Gossypium hirsutum
Gorai.009G184000 Gossypium raimondii
GSVIVG01002894001 Vitis vinifera
HanXRQChr16g0515751 Helianthus annuus
Haze_07019 Corylus avellana
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla
HPP92_027483 Vanilla planifolia
Hund29945 Selenicereus undatus
Lalb_Chr18g0057311 Lupinus albus
Lj1A1246T23 Lonicera japonica
Lj6g0009296 Lotus japonicus
Lsat_1_v5_gn_4_63901 Lactuca sativa
Manes.13G088900 Manihot esculenta
Mapoly0011s0174 Marchantia polymorpha
Mapoly0177s0002 Marchantia polymorpha
MBI14_g10146_MAGBIO Magnolia biondii
MCO02G422 Micromonas commoda
MCO12G371 Micromonas commoda
MCO13G503 Micromonas commoda
MD10G1339200 Malus domestica
Medtr2g027010 Medicago truncatula
MELO3C026067.2 Cucumis melo
Migut.M01444 Erythranthe guttata
MSTRG.16053 Avicennia marina
MSTRG.7128 Avicennia marina
Nitab4.5_0001296g0130 Nicotiana tabacum
Nn1g07522 Nelumbo nucifera
Oeu025962.1 Olea europaea
Os02g0725600 Oryza sativa ssp. japonica
Peaxi162Scf00827g00517 Petunia axillaris
PGR042G0366 Punica granatum
PGSC0003DMG400013365 Solanum tuberosum
Phvul.006G138500 Phaseolus vulgaris
Potri.006G004900 Populus trichocarpa
Potri.016G005500 Populus trichocarpa
Pp3c1_33120 Physcomitrium patens
Pp3c2_12110 Physcomitrium patens
PRCOL_00000725 Prasinoderma coloniale
PRCOL_00003979 Prasinoderma coloniale
PRCOL_00005492 Prasinoderma coloniale
Prupe.4G003700 Prunus persica
Psat1g172480 Pisum sativum
PSO339G5884 Papaver somniferum
QL05p067786 Quercus lobata
RcHm_v2.0_Chr2g0120371 Rosa chinensis
Rhsim13G0140600 Rhododendron simsii
Rhsim13G0140700 Rhododendron simsii
Sabra06G0004100 Salix brachista
Sabra16G0010400 Salix brachista
SalBow8G5358 Salvia bowleyana
Sc17g0007990 Simmondsia chinensis
Sed0001140 Sechium edule
SEGI_02626 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40127 Striga asiatica
SGA_v2.0_scaffold7G03695 Striga asiatica
SHI12358 Sapria himalayana
SHI50428 Sapria himalayana
SMO358G0363 Selaginella moellendorffii
Solyc11g012760.2 Solanum lycopersicum
Sopen11g007500 Solanum pennellii
Sp2g12390 Schrenkiella parvula
TAR626G1878 Trochodendron aralioides
THA.LOC104806738 Tarenaya hassleriana
Thecc.06G236400 Theobroma cacao
Thhalv10000943m.g Eutrema salsugineum
TPR.G17550 Trifolium pratense
TWI38G1153 Tripterygium wilfordii
TWI63G0139 Tripterygium wilfordii
unitig_37.g12178 Utricularia gibba
unitig_37.g12179 Utricularia gibba
vmacro03608 Vaccinium macrocarpon
vmacro23227 Vaccinium macrocarpon
VMungo0540G1721 Vigna mungo
Zm00001eb070580 Zea mays
Zm00001eb253250 Zea mays
Zm00001eb264500 Zea mays

User provided reference genes

Program Settings