Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15280 Brassica napus
Aa31sc12G40 Aethionema arabicum
Actinidia16599 Actinidia chinensis
Actinidia30166 Actinidia chinensis
Actinidia32431 Actinidia chinensis
Actinidia32432 Actinidia chinensis
Actinidia34665 Actinidia chinensis
Ah.02g127300 Amaranthus hybridus
Ah.03g138060 Amaranthus hybridus
Aqoxy3G03843 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea
AT1G68720 Arabidopsis thaliana
ATR0618G023 Amborella trichopoda
Atru.chr11.1428 Acer truncatum
AUR62002956 Chenopodium quinoa
AUR62007761 Chenopodium quinoa
BcaB05g24405 Brassica carinata
BcaC03g14978 Brassica carinata
BolC2t08592H Brassica oleracea
BraA02t06590Z Brassica rapa
C02p25130 Brassica napus
CAN.G184.62 Capsicum annuum
CANSAT64G2054 Cannabis sativa
CARHR061530 Cardamine hirsuta
Carub.0002s1526 Capsella rubella
Ca_07880_v3 Cicer arietinum L.
Ca_28720_v3 Cicer arietinum L.
Cc11_g10920 Coffea canephora
Cc11_g10960 Coffea canephora
CDE03G0168 Ceratophyllum demersum
CDE04G2499 Ceratophyllum demersum
Cfa008789 Carpinus fangiana
Ciclev10030527m.g Citrus clementina
CiPaw.05G117000 Carya illinoinensis
ClCG00G003720 Citrullus lanatus
ClCG05G023220 Citrullus lanatus
COL.COLO4_11242 Corchorus olitorius
Cpa.g.sc1.245 Carica papaya
Cre13.g573300 Chlamydomonas reinhardtii
CsaV3_5G033800 Cucumis sativus L.
CSS0021505 Camellia sinensis var. sinensis
DCAR_009846 Daucus carota
Dinv16542 Davidia involucrata
Dinv16543 Davidia involucrata
Duzib251G0619 Durio zibethinus
ECA233G2219 Erigeron canadensis
ECA234G1298 Erigeron canadensis
EL10Ac6g14546 Beta vulgaris
Eucgr.G02380 Eucalyptus grandis
FAN07G1378 Fragaria x ananassa
FAN12G0975 Fragaria x ananassa
FAN17G1167 Fragaria x ananassa
FAN17G2383 Fragaria x ananassa
FAN22G2135 Fragaria x ananassa
FvH4_4g28440 Fragaria vesca
Glyma.01G092400 Glycine max
Glyma.02G129800 Glycine max
Gohir.A12G173400 Gossypium hirsutum
Gohir.D12G176000 Gossypium hirsutum
Gorai.008G188400 Gossypium raimondii
GSVIVG01012004001 Vitis vinifera
HanXRQChr08g0214571 Helianthus annuus
HanXRQChr08g0214581 Helianthus annuus
HanXRQChr16g0527001 Helianthus annuus
Haze_11801 Corylus avellana
Haze_27655 Corylus avellana
Hma1.2p1_1391F.1_g280150 Hydrangea macrophylla
Hma1.2p1_1391F.1_g280160 Hydrangea macrophylla
Hund05782 Selenicereus undatus
Lalb_Chr10g0099591 Lupinus albus
Lalb_Chr17g0341801 Lupinus albus
Lj2g0014013 Lotus japonicus
Lj6A769T91 Lonicera japonica
Lsat_1_v5_gn_4_20360 Lactuca sativa
Lsat_1_v5_gn_8_38000 Lactuca sativa
Manes.06G075700 Manihot esculenta
Mapoly0072s0096 Marchantia polymorpha
MBI16_g36049_MAGBIO Magnolia biondii
MCO07G010 Micromonas commoda
MD13G1050100 Malus domestica
MD13G1050300 Malus domestica
MD16G1051000 Malus domestica
Medtr4g012000 Medicago truncatula
MELO3C012197.2 Cucumis melo
Migut.E00279 Erythranthe guttata
MSTRG.13492 Avicennia marina
Nitab4.5_0003073g0050 Nicotiana tabacum
Nitab4.5_0010558g0010 Nicotiana tabacum
Nn3g17656 Nelumbo nucifera
Oeu041861.2 Olea europaea
Oeu056581.1 Olea europaea
Os06g0489500 Oryza sativa ssp. japonica
Peaxi162Scf00198g00414 Petunia axillaris
PGR119G1261 Punica granatum
PGSC0003DMG400025103 Solanum tuberosum
Phvul.003G024300 Phaseolus vulgaris
Potri.008G111100 Populus trichocarpa
Potri.010G132600 Populus trichocarpa
Pp3c2_32600 Physcomitrium patens
Pp3c9_12190 Physcomitrium patens
Pp3s196_80 Physcomitrium patens
PRCOL_00006665 Prasinoderma coloniale
Prupe.1G301600 Prunus persica
Psat2g089040 Pisum sativum
PSO063G5162 Papaver somniferum
PSO782G0099 Papaver somniferum
QL03p044642 Quercus lobata
QL04p093902 Quercus lobata
RcHm_v2.0_Chr4g0436391 Rosa chinensis
RcHm_v2.0_Chr4g0436401 Rosa chinensis
Rhsim09G0115000 Rhododendron simsii
Sabra08G0084000 Salix brachista
Sabra10G0101300 Salix brachista
SalBow6G0282 Salvia bowleyana
SalBow8G1626 Salvia bowleyana
SalBow8G5042 Salvia bowleyana
Sc04g0006910 Simmondsia chinensis
Sc14g0007640 Simmondsia chinensis
Sed0017603 Sechium edule
SEGI_38327 Sequoiadendron giganteum
SGA_v2.0_scaffold59G20635 Striga asiatica
Solyc05g010100.4 Solanum lycopersicum
Sopen05g005890 Solanum pennellii
Sp5g23820 Schrenkiella parvula
TAR374G0766 Trochodendron aralioides
TAR622G0197 Trochodendron aralioides
TAR629G0806 Trochodendron aralioides
TAR629G2890 Trochodendron aralioides
THA.LOC104801666 Tarenaya hassleriana
THA.LOC104808436 Tarenaya hassleriana
Thecc.02G364500 Theobroma cacao
Thhalv10018020m.g Eutrema salsugineum
TPR.G24201 Trifolium pratense
TWI31G0478 Tripterygium wilfordii
TWI79G0683 Tripterygium wilfordii
unitig_27.g25227 Utricularia gibba
vmacro10503 Vaccinium macrocarpon
VMungo1215G0217 Vigna mungo
Zm00001eb382160 Zea mays

User provided reference genes

Program Settings