Gene: Sopen05g005890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g005890
  • Transcript Identifier Sopen05g005890.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 4741024-4747385 : negative

Gene Family Information

  • ID HOM05D005486
  • #Genes/#Species 140/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g005890.1

Descriptions

  • Description Encodes the chloroplastic A-to-I tRNA editing enzyme. | tRNA arginine adenosine deaminase (TADA) | FUNCTIONS IN: hydrolase activity, tRNA-specific adenosine deaminase activity, zinc ion binding | INVOLVED IN: tRNA wobble adenosine to inosine editing | LOCATED IN: chloroplast, plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: CMP/dCMP deaminase, zinc-binding , Cytidine deaminase-like | BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002100
ISO
PLAZA Integrative OrthologytRNA wobble adenosine to inosine editing AT1G68720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0008251
ISO
PLAZA Integrative OrthologytRNA-specific adenosine deaminase activity AT1G68720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G68720
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G68720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002125 Cytidine and deoxycytidylate deaminase domain
IPR016193 Cytidine deaminase-like
Mapman id Description
16.11.3.4.1 RNA processing.organelle machinery.RNA modification.A-to-I RNA editing.chloroplast-tRNA adenosine deaminase