Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12360 Brassica napus
Aa31LG7G970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1673 Anthoceros agrestis
Actinidia23548 Actinidia chinensis
Ah.04g163250 Amaranthus hybridus
AL1G18280 Arabidopsis lyrata
AL1G28560 Arabidopsis lyrata
Aqoxy3G02314 Aquilegia oxysepala
Aqoxy3G02759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9U3PF1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WT0EG6 Arachis hypogaea
AT1G07950 Arabidopsis thaliana
AT1G16430 Arabidopsis thaliana
ATR0019G018 Amborella trichopoda
Atru.chr3.2997 Acer truncatum
AUR62006203 Chenopodium quinoa
AUR62030412 Chenopodium quinoa
BcaB02g06622 Brassica carinata
BcaC05g25573 Brassica carinata
BolC5t30184H Brassica oleracea
BraA06t24400Z Brassica rapa
C05p14630 Brassica napus
CAN.G1618.6 Capsicum annuum
CAN.G584.55 Capsicum annuum
CANSAT56G3386 Cannabis sativa
CARHR016900 Cardamine hirsuta
Carub.0001s0730 Capsella rubella
Carub.0001s1617 Capsella rubella
Ca_03324_v3 Cicer arietinum L.
Cc02_g22920 Coffea canephora
CDE02G4404 Ceratophyllum demersum
Cfa010706 Carpinus fangiana
Ciclev10022715m.g Citrus clementina
CiPaw.05G164700 Carya illinoinensis
ClCG11G011870 Citrullus lanatus
COL.COLO4_05834 Corchorus olitorius
Cpa.g.sc16.3 Carica papaya
CsaV3_1G046300 Cucumis sativus L.
CSS0004524 Camellia sinensis var. sinensis
CSS0015948 Camellia sinensis var. sinensis
CSS0034504 Camellia sinensis var. sinensis
DCAR_014816 Daucus carota
DCAR_027354 Daucus carota
Dinv42877 Davidia involucrata
Dinv43223 Davidia involucrata
Dinv44073 Davidia involucrata
Duzib116G0688 Durio zibethinus
ECA238G3108 Erigeron canadensis
EL10Ac5g12584 Beta vulgaris
Eucgr.C03287 Eucalyptus grandis
Eucgr.C04269 Eucalyptus grandis
Eucgr.C04273 Eucalyptus grandis
Eucgr.C04279 Eucalyptus grandis
Eucgr.F00079 Eucalyptus grandis
Eucgr.L02967 Eucalyptus grandis
FAN11G0784 Fragaria x ananassa
FAN16G2737 Fragaria x ananassa
FAN21G1331 Fragaria x ananassa
FAN25G2434 Fragaria x ananassa
FvH4_3g13800 Fragaria vesca
Glyma.08G160100 Glycine max
Glyma.15G204300 Glycine max
Gohir.A02G061000 Gossypium hirsutum
Gohir.D02G066500 Gossypium hirsutum
Gorai.005G075400 Gossypium raimondii
GSVIVG01036692001 Vitis vinifera
HanXRQChr14g0437971 Helianthus annuus
Haze_03266 Corylus avellana
Haze_03271 Corylus avellana
Hma1.2p1_0817F.1_g223090 Hydrangea macrophylla
HPP92_024623 Vanilla planifolia
Hund11041 Selenicereus undatus
Lalb_Chr01g0015641 Lupinus albus
Lj7A456T20 Lonicera japonica
LjContig00222g0019384 Lotus japonicus
Lsat_1_v5_gn_2_59100 Lactuca sativa
Manes.03G077300 Manihot esculenta
Mapoly0161s0019 Marchantia polymorpha
MD02G1009700 Malus domestica
Medtr2g062860 Medicago truncatula
MELO3C021751.2 Cucumis melo
Migut.N01785 Erythranthe guttata
MSTRG.26291 Avicennia marina
Nitab4.5_0000548g0210 Nicotiana tabacum
Nitab4.5_0009812g0020 Nicotiana tabacum
Nn4g23117 Nelumbo nucifera
Oeu050474.1 Olea europaea
Oeu051694.1 Olea europaea
Os01g0132700 Oryza sativa ssp. japonica
Os08g0480500 Oryza sativa ssp. japonica
Peaxi162Scf00003g03942 Petunia axillaris
Peaxi162Scf00003g04025 Petunia axillaris
Peaxi162Scf03254g00010 Petunia axillaris
Peaxi162Scf03393g00016 Petunia axillaris
Peaxi162Scf03393g00018 Petunia axillaris
PGR083G0776 Punica granatum
PGSC0003DMG400009083 Solanum tuberosum
Phvul.005G043700 Phaseolus vulgaris
Potri.008G080700 Populus trichocarpa
Pp3c20_1390 Physcomitrium patens
Pp3c24_19620 Physcomitrium patens
Prupe.7G260300 Prunus persica
Psat1g130720 Pisum sativum
PSO210G6955 Papaver somniferum
PSO339G4006 Papaver somniferum
PSO384G3609 Papaver somniferum
PSO832G0230 Papaver somniferum
QL02p100061 Quercus lobata
QL04p071374 Quercus lobata
QL11p022585 Quercus lobata
RcHm_v2.0_Chr5g0022991 Rosa chinensis
Rhsim03G0256400 Rhododendron simsii
Rhsim10G0195600 Rhododendron simsii
Sabra08G0060000 Salix brachista
Sc16g0002320 Simmondsia chinensis
Sed0018631 Sechium edule
SEGI_11251 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36309 Striga asiatica
SGA_v2.0_scaffold19G08578 Striga asiatica
SGA_v2.0_scaffold19G08607 Striga asiatica
SGA_v2.0_scaffold19G08613 Striga asiatica
SGA_v2.0_scaffold711G53500 Striga asiatica
SHI19173 Sapria himalayana
SMO141G0142 Selaginella moellendorffii
Solyc03g083300.3 Solanum lycopersicum
Sopen03g023050 Solanum pennellii
Sp1g14580 Schrenkiella parvula
TAR624G1317 Trochodendron aralioides
THA.LOC104812397 Tarenaya hassleriana
Thecc.05G251100 Theobroma cacao
Thecc.08G200900 Theobroma cacao
Thhalv10008938m.g Eutrema salsugineum
TPR.G39484 Trifolium pratense
TWI18G1141 Tripterygium wilfordii
unitig_26.g9672 Utricularia gibba
unitig_749.g13420 Utricularia gibba
vmacro06089 Vaccinium macrocarpon
VMungo1080G0054 Vigna mungo
Zm00001eb228470 Zea mays
Zm00001eb335330 Zea mays

User provided reference genes

Program Settings