Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22860 Brassica napus
A04p31080 Brassica napus
Aa31LG3G1470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis
Actinidia35540 Actinidia chinensis
Ah.04g161240 Amaranthus hybridus
AL4G38520 Arabidopsis lyrata
Aqoxy2G02863 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea
AT2G40650 Arabidopsis thaliana
ATR0469G001 Amborella trichopoda
ATR0693G087 Amborella trichopoda
ATR0693G223 Amborella trichopoda
ATR1164G001 Amborella trichopoda
Atru.chr2.115 Acer truncatum
AUR62000721 Chenopodium quinoa
AUR62005243 Chenopodium quinoa
BcaB01g03524 Brassica carinata
BcaB06g27834 Brassica carinata
BcaB06g29159 Brassica carinata
BcaB06g29163 Brassica carinata
BcaB06g29166 Brassica carinata
BcaC01g05387 Brassica carinata
BcaC02g07328 Brassica carinata
BolC3t15092H Brassica oleracea
BolC4t28347H Brassica oleracea
BraA03t11510Z Brassica rapa
BraA04t18563Z Brassica rapa
C03p27110 Brassica napus
C04p68470 Brassica napus
CAN.G1273.26 Capsicum annuum
CANSAT54G2596 Cannabis sativa
CARHR135760 Cardamine hirsuta
Carub.0004s2294 Capsella rubella
Ca_10154_v3 Cicer arietinum L.
Ca_29832_v3 Cicer arietinum L.
CBR_g27792 Chara braunii
Cc02_g34540 Coffea canephora
CDE02G0330 Ceratophyllum demersum
Cfa006671 Carpinus fangiana
Ciclev10001489m.g Citrus clementina
CiPaw.07G025400 Carya illinoinensis
ClCG02G015170 Citrullus lanatus
COL.COLO4_07356 Corchorus olitorius
COL.COLO4_26689 Corchorus olitorius
Cpa.g.sc48.125 Carica papaya
Cre12.g503400 Chlamydomonas reinhardtii
CsaV3_2G006840 Cucumis sativus L.
CSS0007056 Camellia sinensis var. sinensis
CSS0046729 Camellia sinensis var. sinensis
DCAR_004503 Daucus carota
Dinv24409 Davidia involucrata
Dinv30846 Davidia involucrata
Duzib150G0691 Durio zibethinus
ECA236G4663 Erigeron canadensis
EL10Ac4g09870 Beta vulgaris
Eucgr.H03270 Eucalyptus grandis
FAN02G3486 Fragaria x ananassa
FAN05G0688 Fragaria x ananassa
FAN14G1909 Fragaria x ananassa
FvH4_6g07010 Fragaria vesca
Glyma.10G149900 Glycine max
Glyma.20G238500 Glycine max
Gohir.A10G155100 Gossypium hirsutum
Gohir.D10G110800 Gossypium hirsutum
Gorai.011G122100 Gossypium raimondii
GSVIVG01031188001 Vitis vinifera
HanXRQChr01g0011821 Helianthus annuus
Haze_04100 Corylus avellana
Haze_21277 Corylus avellana
Haze_27467 Corylus avellana
HPP92_020212 Vanilla planifolia
HPP92_020232 Vanilla planifolia
HPP92_021396 Vanilla planifolia
Hund07118 Selenicereus undatus
Lalb_Chr02g0148011 Lupinus albus
Lalb_Chr21g0310441 Lupinus albus
Lj3g0025046 Lotus japonicus
Lj5g0011296 Lotus japonicus
Lj9A202T65 Lonicera japonica
Lj9C202T10 Lonicera japonica
Lsat_1_v5_gn_7_73220 Lactuca sativa
Manes.13G000084 Manihot esculenta
Mapoly0138s0022 Marchantia polymorpha
MBI18_g04564_MAGBIO Magnolia biondii
MCO01G394 Micromonas commoda
MD04G1196900 Malus domestica
MD12G1209800 Malus domestica
Medtr1g083720 Medicago truncatula
MELO3C004206.2 Cucumis melo
Migut.B01005 Erythranthe guttata
Nitab4.5_0001971g0070 Nicotiana tabacum
Nitab4.5_0002612g0040 Nicotiana tabacum
Nitab4.5_0003248g0020 Nicotiana tabacum
Nn4g25707 Nelumbo nucifera
Oeu029357.1 Olea europaea
Oeu045895.1 Olea europaea
Os09g0103600 Oryza sativa ssp. japonica
Peaxi162Scf00037g01816 Petunia axillaris
Peaxi162Scf00404g00814 Petunia axillaris
PGR031G1007 Punica granatum
PGSC0003DMG400024728 Solanum tuberosum
Phvul.007G199400 Phaseolus vulgaris
Potri.005G021600 Populus trichocarpa
Potri.013G012000 Populus trichocarpa
Pp3c1_35390 Physcomitrium patens
PRCOL_00004539 Prasinoderma coloniale
Prupe.1G236900 Prunus persica
Prupe.6G317400 Prunus persica
Psat6g151720 Pisum sativum
PSO170G1114 Papaver somniferum
PSO407G0035 Papaver somniferum
QL03p018901 Quercus lobata
QL03p018920 Quercus lobata
RcHm_v2.0_Chr3g0456541 Rosa chinensis
RcHm_v2.0_Chr7g0209371 Rosa chinensis
RcHm_v2.0_Chr7g0209411 Rosa chinensis
Rhsim11G0092200 Rhododendron simsii
Sabra13G0010600 Salix brachista
SalBow1G5723 Salvia bowleyana
Sc16g0008670 Simmondsia chinensis
Sed0018701 Sechium edule
SEGI_07889 Sequoiadendron giganteum
SEGI_13779 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01947 Striga asiatica
SMO361G0640 Selaginella moellendorffii
Solyc01g100060.4 Solanum lycopersicum
Sopen01g043590 Solanum pennellii
Sp4g22980 Schrenkiella parvula
TAR362G1077 Trochodendron aralioides
TAR636G1951 Trochodendron aralioides
THA.LOC104805907 Tarenaya hassleriana
THA.LOC104820733 Tarenaya hassleriana
Thecc.06G040900 Theobroma cacao
TWI12G1149 Tripterygium wilfordii
TWI38G1969 Tripterygium wilfordii
TWI56G0052 Tripterygium wilfordii
vmacro01533 Vaccinium macrocarpon
VMungo0720G1843 Vigna mungo
Zm00001eb095730 Zea mays

User provided reference genes

Program Settings