Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p08330 Brassica napus
Aa31LG1G18400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2504 Anthoceros agrestis
Actinidia18334 Actinidia chinensis
Actinidia25556 Actinidia chinensis
Ah.11g045540 Amaranthus hybridus
AL8G40620 Arabidopsis lyrata
Aqoxy3G01618 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea
AT5G63540 Arabidopsis thaliana
ATR0582G259 Amborella trichopoda
Atru.chr6.1849 Acer truncatum
AUR62029576 Chenopodium quinoa
AUR62038846 Chenopodium quinoa
AUR62043951 Chenopodium quinoa
BcaB04g19924 Brassica carinata
BcaC04g23337 Brassica carinata
BolC9t53852H Brassica oleracea
BraA09t36482Z Brassica rapa
C09p09400 Brassica napus
CAN.G2034.2 Capsicum annuum
CANSAT25G2590 Cannabis sativa
CARHR277400 Cardamine hirsuta
Carub.0008s2427 Capsella rubella
Ca_17566_v3 Cicer arietinum L.
Ca_29727_v3 Cicer arietinum L.
CBR_g45436 Chara braunii
Cc10_g14800 Coffea canephora
CDE05G0217 Ceratophyllum demersum
Cfa018765 Carpinus fangiana
Ciclev10031056m.g Citrus clementina
CiPaw.13G052100 Carya illinoinensis
ClCG06G018070 Citrullus lanatus
COL.COLO4_16633 Corchorus olitorius
Cpa.g.sc4.162 Carica papaya
Cre17.g712450 Chlamydomonas reinhardtii
CsaV3_1G000400 Cucumis sativus L.
CSS0000208 Camellia sinensis var. sinensis
CSS0026788 Camellia sinensis var. sinensis
CSS0031481 Camellia sinensis var. sinensis
DCAR_021639 Daucus carota
Dinv11193 Davidia involucrata
Duzib068G0666 Durio zibethinus
ECA232G0893 Erigeron canadensis
EL10Ac5g11383 Beta vulgaris
Eucgr.B00088 Eucalyptus grandis
FAN19G3201 Fragaria x ananassa
FAN23G0140 Fragaria x ananassa
FAN26G2295 Fragaria x ananassa
FAN28G1156 Fragaria x ananassa
FvH4_1g26610 Fragaria vesca
Glyma.08G010700 Glycine max
Gohir.A07G049320 Gossypium hirsutum
Gohir.A07G049360 Gossypium hirsutum
Gohir.D07G053600 Gossypium hirsutum
Gorai.001G056700 Gossypium raimondii
GSVIVG01008582001 Vitis vinifera
HanXRQChr09g0273461 Helianthus annuus
Haze_07175 Corylus avellana
HPP92_021692 Vanilla planifolia
HPP92_021694 Vanilla planifolia
HPP92_021709 Vanilla planifolia
Hund02456 Selenicereus undatus
Lalb_Chr13g0297171 Lupinus albus
Lj4g0026231 Lotus japonicus
Lj9C481T20 Lonicera japonica
Lsat_1_v5_gn_4_20540 Lactuca sativa
Lsat_1_v5_gn_4_82521 Lactuca sativa
Lsat_1_v5_gn_8_99581 Lactuca sativa
Manes.06G122000 Manihot esculenta
Mapoly0147s0014 Marchantia polymorpha
MBI07_g01996_MAGBIO Magnolia biondii
MCO10G310 Micromonas commoda
MD14G1152700 Malus domestica
Medtr1g069480 Medicago truncatula
Medtr1g071270 Medicago truncatula
Medtr1g071290 Medicago truncatula
Medtr8g096570 Medicago truncatula
MELO3C026191.2 Cucumis melo
Migut.I00557 Erythranthe guttata
MSTRG.22895 Avicennia marina
Nitab4.5_0001213g0090 Nicotiana tabacum
Nitab4.5_0003683g0010 Nicotiana tabacum
Nn4g22247 Nelumbo nucifera
Oeu030666.2 Olea europaea
Os04g0391000 Oryza sativa ssp. japonica
Peaxi162Scf00047g00185 Petunia axillaris
PGR083G0902 Punica granatum
PGSC0003DMG400013896 Solanum tuberosum
Phvul.002G284900 Phaseolus vulgaris
Potri.015G100200 Populus trichocarpa
Pp3c4_19920 Physcomitrium patens
PRCOL_00000625 Prasinoderma coloniale
Prupe.5G147700 Prunus persica
Psat7g037120 Pisum sativum
PSO013G0019 Papaver somniferum
PSO017G0412 Papaver somniferum
PSO017G3192 Papaver somniferum
PSO063G6394 Papaver somniferum
PSO063G6924 Papaver somniferum
PSO302G0032 Papaver somniferum
PSO478G1426 Papaver somniferum
PSO478G2612 Papaver somniferum
PSO782G1992 Papaver somniferum
QL10p002178 Quercus lobata
QL10p002191 Quercus lobata
RcHm_v2.0_Chr7g0189541 Rosa chinensis
Rhsim08G0192500 Rhododendron simsii
Sabra15G0120800 Salix brachista
SalBow5G0795 Salvia bowleyana
Sc10g0010570 Simmondsia chinensis
Sed0003726 Sechium edule
SEGI_11582 Sequoiadendron giganteum
SEGI_12458 Sequoiadendron giganteum
SGA_v2.0_scaffold414G51200 Striga asiatica
SHI10695 Sapria himalayana
SHI10696 Sapria himalayana
SHI10702 Sapria himalayana
SHI31561 Sapria himalayana
SMO146G0204 Selaginella moellendorffii
SMO146G0239 Selaginella moellendorffii
SMO173G0006 Selaginella moellendorffii
SMO173G0041 Selaginella moellendorffii
Solyc05g014400.4 Solanum lycopersicum
Solyc12g005900.3 Solanum lycopersicum
Sopen05g009520 Solanum pennellii
Sopen12g001850 Solanum pennellii
Sp2g26630 Schrenkiella parvula
TAR381G1645 Trochodendron aralioides
TAR629G1046 Trochodendron aralioides
TAR629G2415 Trochodendron aralioides
THA.LOC104798938 Tarenaya hassleriana
Thecc.03G133700 Theobroma cacao
Thhalv10003815m.g Eutrema salsugineum
TPR.G12905 Trifolium pratense
TPR.G12965 Trifolium pratense
unitig_8.g4692 Utricularia gibba
vmacro19135 Vaccinium macrocarpon
VMungo0251G3541 Vigna mungo
Zm00001eb085270 Zea mays

User provided reference genes

Program Settings