Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10200 Brassica napus
A09p36640 Brassica napus
Aa31LG6G5780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis
Actinidia39556 Actinidia chinensis
AL1G43680 Arabidopsis lyrata
Aqoxy4G00127 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HCY9BB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea
AT1G29850 Arabidopsis thaliana
ATR0681G149 Amborella trichopoda
Atru.chr10.1368 Acer truncatum
AUR62023445 Chenopodium quinoa
AUR62027578 Chenopodium quinoa
AUR62035781 Chenopodium quinoa
BcaB03g12183 Brassica carinata
BcaB03g13855 Brassica carinata
BcaB07g32570 Brassica carinata
BcaC01g00143 Brassica carinata
BcaC05g26997 Brassica carinata
BcaC06g35468 Brassica carinata
BolC3t19881H Brassica oleracea
BolC5t31581H Brassica oleracea
BolC7t42063H Brassica oleracea
BraA07t28813Z Brassica rapa
C03p76250 Brassica napus
C05p28570 Brassica napus
C07p15720 Brassica napus
CAN.G257.34 Capsicum annuum
CANSAT35G0205 Cannabis sativa
CARHR029600 Cardamine hirsuta
Carub.0001s2809 Capsella rubella
Ca_18287_v3 Cicer arietinum L.
CBR_g45965 Chara braunii
Cc00_g15980 Coffea canephora
CDE02G1967 Ceratophyllum demersum
CDE08G1548 Ceratophyllum demersum
Ciclev10017167m.g Citrus clementina
CiPaw.09G128300 Carya illinoinensis
ClCG01G024320 Citrullus lanatus
COL.COLO4_07492 Corchorus olitorius
Cpa.g.sc17.100 Carica papaya
Cre12.g557800 Chlamydomonas reinhardtii
CsaV3_6G051470 Cucumis sativus L.
CSS0048314 Camellia sinensis var. sinensis
DCAR_003948 Daucus carota
DCAR_007905 Daucus carota
Dinv32291 Davidia involucrata
Duzib101G0001 Durio zibethinus
Duzib160G0646 Durio zibethinus
Duzib192G1075 Durio zibethinus
Duzib235G1537 Durio zibethinus
ECA248G0679 Erigeron canadensis
EL10Ac8g19776 Beta vulgaris
Eucgr.E02375 Eucalyptus grandis
FAN11G2394 Fragaria x ananassa
FAN16G2304 Fragaria x ananassa
FAN21G0592 Fragaria x ananassa
FAN25G0636 Fragaria x ananassa
FAN25G2540 Fragaria x ananassa
FvH4_3g06230 Fragaria vesca
Glyma.05G127400 Glycine max
Glyma.08G082100 Glycine max
Gohir.A08G088100 Gossypium hirsutum
Gohir.A10G038300 Gossypium hirsutum
Gohir.D10G039300 Gossypium hirsutum
Gorai.011G041300 Gossypium raimondii
GSVIVG01021395001 Vitis vinifera
HanXRQChr09g0255931 Helianthus annuus
HanXRQChr11g0340931 Helianthus annuus
Haze_05531 Corylus avellana
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla
HPP92_021557 Vanilla planifolia
Hund21493 Selenicereus undatus
Hund21505 Selenicereus undatus
Lalb_Chr12g0208831 Lupinus albus
Lj2A310T44 Lonicera japonica
Lj4g0012372 Lotus japonicus
Lsat_1_v5_gn_1_91580 Lactuca sativa
Manes.15G118100 Manihot esculenta
Manes.17G066000 Manihot esculenta
Mapoly0080s0013 Marchantia polymorpha
MBI07_g07833_MAGBIO Magnolia biondii
MD05G1290500 Malus domestica
MD09G1183100 Malus domestica
MD16G1202800 Malus domestica
Medtr4g094580 Medicago truncatula
MELO3C007159.2 Cucumis melo
Migut.H01386 Erythranthe guttata
MSTRG.14760 Avicennia marina
MSTRG.16208 Avicennia marina
Nitab4.5_0000206g0130 Nicotiana tabacum
Nitab4.5_0003527g0030 Nicotiana tabacum
Nitab4.5_0008782g0030 Nicotiana tabacum
Nn3g20867 Nelumbo nucifera
Nn4g23354 Nelumbo nucifera
Nn4g26481 Nelumbo nucifera
Oeu012458.1 Olea europaea
Oeu046548.1 Olea europaea
Oeu052389.2 Olea europaea
Os05g0546500 Oryza sativa ssp. japonica
Os05g0547850 Oryza sativa ssp. japonica
Peaxi162Scf00121g02445 Petunia axillaris
Peaxi162Scf00482g00049 Petunia axillaris
PGR042G3093 Punica granatum
PGSC0003DMG400003081 Solanum tuberosum
Phvul.002G197500 Phaseolus vulgaris
Potri.001G352600 Populus trichocarpa
Pp3c14_19320 Physcomitrium patens
PRCOL_00005423 Prasinoderma coloniale
Prupe.4G075200 Prunus persica
Psat7g091480 Pisum sativum
PSO017G4964 Papaver somniferum
PSO170G1289 Papaver somniferum
QL05p060078 Quercus lobata
RcHm_v2.0_Chr5g0013081 Rosa chinensis
Rhsim02G0154900 Rhododendron simsii
Sabra16G0231900 Salix brachista
SalBow7G3345 Salvia bowleyana
Sc05g0006520 Simmondsia chinensis
Sed0003587 Sechium edule
SEGI_04398 Sequoiadendron giganteum
SGA_v2.0_scaffold333G49013 Striga asiatica
SMO358G0232 Selaginella moellendorffii
Solyc02g071150.3 Solanum lycopersicum
Sopen02g020230 Solanum pennellii
Sp1g25740 Schrenkiella parvula
TAR626G1892 Trochodendron aralioides
TAR627G1065 Trochodendron aralioides
TAR636G3446 Trochodendron aralioides
THA.LOC104812663 Tarenaya hassleriana
THA.LOC104814282 Tarenaya hassleriana
Thecc.06G156200 Theobroma cacao
Thhalv10009098m.g Eutrema salsugineum
TWI09G1218 Tripterygium wilfordii
TWI53G0717 Tripterygium wilfordii
unitig_26.g10094 Utricularia gibba
VMungo0251G2631 Vigna mungo
Zm00001eb294640 Zea mays
Zm00001eb342640 Zea mays

User provided reference genes

Program Settings