Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11810 Brassica napus
A03p15670 Brassica napus
Aa31LG3G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3925 Anthoceros agrestis
Actinidia20875 Actinidia chinensis
Actinidia34140 Actinidia chinensis
Ah.13g068730 Amaranthus hybridus
AL1G34290 Arabidopsis lyrata
AL2G18000 Arabidopsis lyrata
AL3G17700 Arabidopsis lyrata
AL7G52340 Arabidopsis lyrata
AL8G26870 Arabidopsis lyrata
Aqoxy7G00281 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20ERFR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8QCSH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QSSI4A Arachis hypogaea
AT5G52440 Arabidopsis thaliana
ATR0680G109 Amborella trichopoda
Atru.chr1.400 Acer truncatum
AUR62021148 Chenopodium quinoa
AUR62031389 Chenopodium quinoa
BcaB01g04187 Brassica carinata
BcaB01g04203 Brassica carinata
BcaB02g10956 Brassica carinata
BcaB05g21960 Brassica carinata
BcaC01g06187 Brassica carinata
BcaC03g14530 Brassica carinata
BolC2t08101H Brassica oleracea
BolC3t14229H Brassica oleracea
BraA02t06246Z Brassica rapa
BraA03t10859Z Brassica rapa
C02p19650 Brassica napus
C03p18310 Brassica napus
CAN.G236.14 Capsicum annuum
CANSAT21G2457 Cannabis sativa
CARHR265430 Cardamine hirsuta
Carub.0008s1254 Capsella rubella
CBR_g49097 Chara braunii
Cc02_g02590 Coffea canephora
CDE09G0642 Ceratophyllum demersum
Cfa016268 Carpinus fangiana
Ciclev10005655m.g Citrus clementina
CiPaw.06G001100 Carya illinoinensis
CiPaw.06G001400 Carya illinoinensis
ClCG05G008230 Citrullus lanatus
COL.COLO4_28026 Corchorus olitorius
Cpa.g.sc107.83 Carica papaya
Cre08.g371650 Chlamydomonas reinhardtii
CsaV3_3G017320 Cucumis sativus L.
CSS0038684 Camellia sinensis var. sinensis
DCAR_009379 Daucus carota
Dinv35232 Davidia involucrata
Duzib084G0056 Durio zibethinus
Duzib205G1046 Durio zibethinus
ECA232G4406 Erigeron canadensis
ECA233G3491 Erigeron canadensis
EL10Ac3g05591 Beta vulgaris
Eucgr.K00283 Eucalyptus grandis
FAN01G1606 Fragaria x ananassa
FAN03G2197 Fragaria x ananassa
FAN03G2430 Fragaria x ananassa
FAN06G2500 Fragaria x ananassa
FAN06G2733 Fragaria x ananassa
FAN10G0028 Fragaria x ananassa
FAN10G2308 Fragaria x ananassa
FvH4_7g29980 Fragaria vesca
Glyma.10G232400 Glycine max
Glyma.20G161700 Glycine max
Gohir.A09G042000 Gossypium hirsutum
Gohir.D09G043122 Gossypium hirsutum
Gorai.006G049600 Gossypium raimondii
GSVIVG01028894001 Vitis vinifera
HanXRQChr09g0252451 Helianthus annuus
Haze_00025 Corylus avellana
Hma1.2p1_0044F.1_g025970 Hydrangea macrophylla
Hma1.2p1_0227F.1_g096040 Hydrangea macrophylla
Hma1.2p1_0299F.1_g117880 Hydrangea macrophylla
HPP92_014785 Vanilla planifolia
HPP92_028097 Vanilla planifolia
Hund04774 Selenicereus undatus
Hund11730 Selenicereus undatus
Lalb_Chr02g0141171 Lupinus albus
Lalb_Chr06g0161271 Lupinus albus
Lj5g0000296 Lotus japonicus
Lsat_1_v5_gn_8_6901 Lactuca sativa
Lsat_1_v5_gn_9_57581 Lactuca sativa
Manes.06G150900 Manihot esculenta
Manes.14G024100 Manihot esculenta
Mapoly0083s0037 Marchantia polymorpha
MBI17_g35259_MAGBIO Magnolia biondii
MCO14G251 Micromonas commoda
MD07G1276100 Malus domestica
Medtr1g100220 Medicago truncatula
MELO3C006928.2 Cucumis melo
Migut.F00319 Erythranthe guttata
Migut.F01097 Erythranthe guttata
MSTRG.27099 Avicennia marina
Nitab4.5_0000084g0270 Nicotiana tabacum
Nitab4.5_0001625g0010 Nicotiana tabacum
Nn1g01558 Nelumbo nucifera
Oeu004115.1 Olea europaea
Oeu022600.1 Olea europaea
Os06g0102600 Oryza sativa ssp. japonica
Os11g0580800 Oryza sativa ssp. japonica
Peaxi162Scf00057g10027 Petunia axillaris
PGR142G2432 Punica granatum
PGSC0003DMG400010161 Solanum tuberosum
Phvul.007G073200 Phaseolus vulgaris
Potri.012G144300 Populus trichocarpa
Potri.015G147100 Populus trichocarpa
Pp3c16_8830 Physcomitrium patens
Pp3c5_19450 Physcomitrium patens
Pp3c5_19453 Physcomitrium patens
PRCOL_00002629 Prasinoderma coloniale
Prupe.2G298400 Prunus persica
Psat6g193680 Pisum sativum
PSO478G1134 Papaver somniferum
PSO782G3185 Papaver somniferum
QL09p013410 Quercus lobata
RcHm_v2.0_Chr1g0377931 Rosa chinensis
Rhsim03G0188900 Rhododendron simsii
RhsimUnG0027200 Rhododendron simsii
Sabra12G0108300 Salix brachista
SalBow4G0945 Salvia bowleyana
Sc19g0001360 Simmondsia chinensis
Sed0004337 Sechium edule
SEGI_07365 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16739 Striga asiatica
SMO223G0008 Selaginella moellendorffii
Solyc03g025310.3 Solanum lycopersicum
Sopen03g004140 Solanum pennellii
Sp6g14660 Schrenkiella parvula
TAR636G3226 Trochodendron aralioides
THA.LOC104825106 Tarenaya hassleriana
Thecc.03G181600 Theobroma cacao
Thhalv10014513m.g Eutrema salsugineum
TWI23G0148 Tripterygium wilfordii
TWI39G0402 Tripterygium wilfordii
VMungo0720G1970 Vigna mungo
Zm00001eb085050 Zea mays
Zm00001eb421330 Zea mays

User provided reference genes

Program Settings