Gene: AT5G52440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G52440
  • Transcript Identifier AT5G52440.1
  • Gene Type Coding gene
  • Location Chr5 : 21286896-21288613 : positive

Gene Family Information

  • ID HOM05D005376
  • #Genes/#Species 141/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G52440.1
  • symbol HCF106
  • full_name HIGH CHLOROPHYLL FLUORESCENCE 106
  • uniprot Q9XH75

Descriptions

  • Description Bacterial sec-independent translocation protein mttA/Hcf106
  • Computational description HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000070
IMP
Gene Ontologyregulation of response to water deprivation1
GO:0043953
IEA
Gene Ontologyprotein transport by the Tat complex
GO:0043953
IEA
InterProprotein transport by the Tat complex
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:1903426
IMP
Gene Ontologyregulation of reactive oxygen species biosynthetic process1
GO:1902458
IMP
Gene Ontologypositive regulation of stomatal opening1
GO:0009409
IMP
Gene Ontologyresponse to cold2
GO:0045038
IDA
Gene Ontologyprotein import into chloroplast thylakoid membrane3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0009977
IDA
Gene Ontologyproton motive force dependent protein transmembrane transporter activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0009579
IEA
GOA Databasethylakoid
GO:0009579
IDA
Gene Ontologythylakoid3
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
Gene Ontologychloroplast1 4
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid5
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid6
GO:0009535
IDA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane7
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope6
GO:0033281
IDA
Gene OntologyTAT protein transport complex8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003369 Sec-independent protein translocase protein TatA/B/E
IPR006312 Sec-independent protein translocase protein TatA/E
Mapman id Description
1.1.1.3.4 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (HCF106)
23.1.6.3 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.component HCF106