Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18650 Brassica napus
A06p28050 Brassica napus
Aa31LG4G17560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4653 Anthoceros agrestis
Actinidia21168 Actinidia chinensis
Actinidia24948 Actinidia chinensis
Ah.05g177620 Amaranthus hybridus
AL5G28610 Arabidopsis lyrata
Aqoxy2G03557 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.W8F73Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZBI3RA Arachis hypogaea
AT3G49100 Arabidopsis thaliana
ATR0665G560 Amborella trichopoda
Atru.chr2.3918 Acer truncatum
Atru.chr5.1594 Acer truncatum
Atru.chr7.944 Acer truncatum
AUR62013793 Chenopodium quinoa
AUR62023362 Chenopodium quinoa
BcaB01g00749 Brassica carinata
BcaB02g09576 Brassica carinata
BcaC01g02388 Brassica carinata
BcaC07g39386 Brassica carinata
BolC3t18839H Brassica oleracea
BolC8t50030H Brassica oleracea
BraA06t24943Z Brassica rapa
BraA06t25747Z Brassica rapa
C03p65820 Brassica napus
C08p24090 Brassica napus
CAN.G575.93 Capsicum annuum
CANSAT01G0877 Cannabis sativa
CANSAT11G1068 Cannabis sativa
CARHR157930 Cardamine hirsuta
Carub.0005s1529 Capsella rubella
CBR_g18652 Chara braunii
Cc01_g18740 Coffea canephora
CDE06G2230 Ceratophyllum demersum
Cfa002338 Carpinus fangiana
Ciclev10023009m.g Citrus clementina
CiPaw.02G033000 Carya illinoinensis
CiPaw.04G182700 Carya illinoinensis
ClCG07G000650 Citrullus lanatus
COL.COLO4_08280 Corchorus olitorius
COL.COLO4_29457 Corchorus olitorius
Cpa.g.sc52.142 Carica papaya
Cre12.g546250 Chlamydomonas reinhardtii
CsaV3_2G013670 Cucumis sativus L.
CSS0009352 Camellia sinensis var. sinensis
CSS0017854 Camellia sinensis var. sinensis
CSS0032008 Camellia sinensis var. sinensis
CSS0047138 Camellia sinensis var. sinensis
DCAR_012520 Daucus carota
Dinv22468 Davidia involucrata
Dinv34577 Davidia involucrata
Duzib138G0987 Durio zibethinus
Duzib211G0177 Durio zibethinus
ECA248G2609 Erigeron canadensis
EL10Ac1g00710 Beta vulgaris
Eucgr.B01502 Eucalyptus grandis
FAN15G3255 Fragaria x ananassa
FAN20G0018 Fragaria x ananassa
FAN24G2777 Fragaria x ananassa
FvH4_2g22310 Fragaria vesca
Glyma.02G141101 Glycine max
Glyma.08G346000 Glycine max
Glyma.10G032800 Glycine max
Glyma.18G156300 Glycine max
Gohir.A08G188600 Gossypium hirsutum
Gohir.A10G156200 Gossypium hirsutum
Gohir.A11G127860 Gossypium hirsutum
Gohir.A12G149900 Gossypium hirsutum
Gohir.D08G207000 Gossypium hirsutum
Gohir.D11G133500 Gossypium hirsutum
Gorai.004G219200 Gossypium raimondii
Gorai.007G142700 Gossypium raimondii
GSVIVG01000751001 Vitis vinifera
HanXRQChr01g0005311 Helianthus annuus
HanXRQChr06g0164391 Helianthus annuus
Haze_24544 Corylus avellana
Hma1.2p1_1029F.1_g249680 Hydrangea macrophylla
HPP92_008005 Vanilla planifolia
Hund17126 Selenicereus undatus
Lalb_Chr03g0041301 Lupinus albus
Lalb_Chr19g0125981 Lupinus albus
Lj5g0027817 Lotus japonicus
Lsat_1_v5_gn_5_186641 Lactuca sativa
Manes.01G200900 Manihot esculenta
Mapoly0042s0050 Marchantia polymorpha
MBI04_g39243_MAGBIO Magnolia biondii
MD05G1204500 Malus domestica
MD10G1191500 Malus domestica
Medtr1g070460 Medicago truncatula
MELO3C014306.2 Cucumis melo
Migut.D00388 Erythranthe guttata
Migut.N02186 Erythranthe guttata
MSTRG.18297 Avicennia marina
MSTRG.21508 Avicennia marina
Nitab4.5_0002310g0090 Nicotiana tabacum
Nn1g02594 Nelumbo nucifera
Nn3g19526 Nelumbo nucifera
Peaxi162Scf00700g00135 Petunia axillaris
PGR102G1093 Punica granatum
PGSC0003DMG400004717 Solanum tuberosum
Phvul.008G134200 Phaseolus vulgaris
Potri.002G043600 Populus trichocarpa
Potri.005G219400 Populus trichocarpa
Pp3c14_7880 Physcomitrium patens
Pp3c2_1790 Physcomitrium patens
PRCOL_00002130 Prasinoderma coloniale
Prupe.8G230800 Prunus persica
Psat4g197520 Pisum sativum
PSO063G5966 Papaver somniferum
PSO832G1599 Papaver somniferum
QL04p081438 Quercus lobata
QL12p042863 Quercus lobata
RcHm_v2.0_Chr6g0289311 Rosa chinensis
Rhsim01G0268500 Rhododendron simsii
Rhsim12G0063100 Rhododendron simsii
Sabra02G0035300 Salix brachista
SalBow4G0280 Salvia bowleyana
Sc02g0003290 Simmondsia chinensis
Sed0003924 Sechium edule
Sed0007692 Sechium edule
SGA_v2.0_scaffold138G35268 Striga asiatica
SGA_v2.0_scaffold1G00570 Striga asiatica
SGA_v2.0_scaffold36G14430 Striga asiatica
Solyc12g099820.1 Solanum lycopersicum
Sopen12g034450 Solanum pennellii
Sp5g12980 Schrenkiella parvula
TAR365G0879 Trochodendron aralioides
TAR633G1352 Trochodendron aralioides
THA.LOC104818165 Tarenaya hassleriana
THA.LOC104821383 Tarenaya hassleriana
Thecc.01G266100 Theobroma cacao
Thhalv10010849m.g Eutrema salsugineum
TPR.G2468 Trifolium pratense
TPR.G35732 Trifolium pratense
TWI18G0681 Tripterygium wilfordii
unitig_26.g10142 Utricularia gibba
vmacro11045 Vaccinium macrocarpon
Zm00001eb281280 Zea mays
Zm00001eb379840 Zea mays

User provided reference genes

Program Settings