Gene: AT3G49100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49100
  • Transcript Identifier AT3G49100.2
  • Gene Type Coding gene
  • Location Chr3 : 18196944-18198298 : positive

Gene Family Information

  • ID HOM05D005373
  • #Genes/#Species 141/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49100.2
  • uniprot Q9SMU7

Descriptions

  • Description Signal recognition particle, SRP9/SRP14 subunit
  • Computational description Signal recognition particle, SRP9/SRP14 subunit; FUNCTIONS IN: 7S RNA binding, signal recognition particle binding; INVOLVED IN: negative regulation of translational elongation, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal recognition particle, SRP9/SRP14 subunit (InterPro:IPR009018), Signal recognition particle, SRP9 subunit (InterPro:IPR008832); Has 222 Blast hits to 222 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 16; Plants - 42; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045900
IEA
Gene Ontologynegative regulation of translational elongation
GO:0045900
IEA
InterPronegative regulation of translational elongation
GO:0006614
IEA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane
GO:0006614
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane1
GO:0006614
IEA
InterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008312
IEA
Gene Ontology7S RNA binding
GO:0008312
IEA
InterPro7S RNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
HDA
Gene Ontologycytosol2
GO:0005786
IEA
GOA Databasesignal recognition particle, endoplasmic reticulum targeting
GO:0005786
IBA
Gene Ontologysignal recognition particle, endoplasmic reticulum targeting1
GO:0048500
IEA
GOA Databasesignal recognition particle
GO:0048500
IEA
InterProsignal recognition particle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008832 Signal recognition particle, SRP9 subunit
IPR039432 SRP9 domain
IPR039914 Signal recognition particle SRP9
IPR009018 Signal recognition particle, SRP9/SRP14 subunit
Mapman id Description
23.3.1.1.3 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP9