Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p04540 Brassica napus
A09p48330 Brassica napus
Aa31LG10G10420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5584 Anthoceros agrestis
Actinidia02893 Actinidia chinensis
Actinidia02894 Actinidia chinensis
Actinidia29217 Actinidia chinensis
Actinidia29218 Actinidia chinensis
AL5G36550 Arabidopsis lyrata
Aqoxy4G02977 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23BIS9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWL0PE Arachis hypogaea
AT3G55400 Arabidopsis thaliana
ATR0730G097 Amborella trichopoda
Atru.BG.276.p Acer truncatum
AUR62038368 Chenopodium quinoa
AUR62040959 Chenopodium quinoa
BcaB01g00104 Brassica carinata
BcaB02g08424 Brassica carinata
BcaC02g09753 Brassica carinata
BcaC02g09754 Brassica carinata
BcaC07g39858 Brassica carinata
BolC4t25262H Brassica oleracea
BolC4t25263H Brassica oleracea
BolC8t50678H Brassica oleracea
BraA04t16165Z Brassica rapa
BraA09t40285Z Brassica rapa
C04p36970 Brassica napus
C04p36980 Brassica napus
C08p30620 Brassica napus
CAN.G1013.7 Capsicum annuum
CANSAT56G3076 Cannabis sativa
CANSAT56G3579 Cannabis sativa
CARHR165410 Cardamine hirsuta
CARHR284680 Cardamine hirsuta
Carub.0005s2211 Capsella rubella
Ca_11289_v3 Cicer arietinum L.
CBR_g833 Chara braunii
Cc02_g08110 Coffea canephora
CDE04G3770 Ceratophyllum demersum
Cfa001500 Carpinus fangiana
Ciclev10030995m.g Citrus clementina
CiPaw.01G284500 Carya illinoinensis
ClCG09G020030 Citrullus lanatus
COL.COLO4_03753 Corchorus olitorius
COL.COLO4_14979 Corchorus olitorius
Cpa.g.sc1.385 Carica papaya
Cpa.g.sc1.387 Carica papaya
Cre12.g487100 Chlamydomonas reinhardtii
CsaV3_5G026430 Cucumis sativus L.
CSS0002854 Camellia sinensis var. sinensis
DCAR_015189 Daucus carota
Dinv25995 Davidia involucrata
Dinv31439 Davidia involucrata
Duzib114G0552 Durio zibethinus
ECA232G2382 Erigeron canadensis
EL10Ac2g03414 Beta vulgaris
Eucgr.J00041 Eucalyptus grandis
FAN02G3866 Fragaria x ananassa
FAN09G1140 Fragaria x ananassa
FAN09G1498 Fragaria x ananassa
FAN09G3765 Fragaria x ananassa
FAN14G3830 Fragaria x ananassa
FAN14G5877 Fragaria x ananassa
FvH4_6g24170 Fragaria vesca
FvH4_6g51210 Fragaria vesca
Glyma.10G289600 Glycine max
Glyma.20G099600 Glycine max
Gohir.A10G216000 Gossypium hirsutum
Gohir.D10G225000 Gossypium hirsutum
Gorai.011G256000 Gossypium raimondii
GSVIVG01016575001 Vitis vinifera
HanXRQChr09g0247741 Helianthus annuus
Haze_17041 Corylus avellana
Haze_27266 Corylus avellana
Hma1.2p1_2133F.1_g314780 Hydrangea macrophylla
HPP92_007845 Vanilla planifolia
Hund12544 Selenicereus undatus
Lalb_Chr06g0164311 Lupinus albus
Lalb_Chr06g0164321 Lupinus albus
Lj5g0009366 Lotus japonicus
Lj8A86G38 Lonicera japonica
Lsat_1_v5_gn_9_65321 Lactuca sativa
Manes.10G032600 Manihot esculenta
Mapoly0109s0018 Marchantia polymorpha
MCO01G351 Micromonas commoda
MCO07G098 Micromonas commoda
MD01G1125100 Malus domestica
MD07G1194800 Malus domestica
Medtr1g018280 Medicago truncatula
Medtr1g115295 Medicago truncatula
MELO3C025447.2 Cucumis melo
Migut.E01300 Erythranthe guttata
Nitab4.5_0001831g0140 Nicotiana tabacum
Nitab4.5_0006342g0040 Nicotiana tabacum
Nn7g38223 Nelumbo nucifera
Oeu059403.2 Olea europaea
Os03g0209600 Oryza sativa ssp. japonica
Peaxi162Scf00015g01517 Petunia axillaris
PGR142G2259 Punica granatum
PGSC0003DMG400023422 Solanum tuberosum
Phvul.007G011800 Phaseolus vulgaris
Potri.010G207300 Populus trichocarpa
Pp3c12_10530 Physcomitrium patens
Pp3c15_23530 Physcomitrium patens
PRCOL_00006366 Prasinoderma coloniale
Prupe.2G232400 Prunus persica
Psat1g079800 Pisum sativum
Psat6g236000 Pisum sativum
PSO339G4546 Papaver somniferum
PSO384G0408 Papaver somniferum
PSO541G2783 Papaver somniferum
QL08p059100 Quercus lobata
QL11p039811 Quercus lobata
QL11p040426 Quercus lobata
QL11p040593 Quercus lobata
RcHm_v2.0_Chr3g0482991 Rosa chinensis
RcHm_v2.0_Chr3g0483011 Rosa chinensis
Rhsim09G0164800 Rhododendron simsii
Sabra10G0160100 Salix brachista
SalBow2G3488 Salvia bowleyana
SalBow2G3494 Salvia bowleyana
Sc04g0005120 Simmondsia chinensis
Sed0015228 Sechium edule
SEGI_38333 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38273 Striga asiatica
SMO196G0053 Selaginella moellendorffii
Solyc05g054600.3 Solanum lycopersicum
Sopen05g033080 Solanum pennellii
Sp5g07070 Schrenkiella parvula
TAR636G1387 Trochodendron aralioides
TAR636G2167 Trochodendron aralioides
TAR636G2926 Trochodendron aralioides
TAR636G3442 Trochodendron aralioides
THA.LOC104807113 Tarenaya hassleriana
Thecc.10G046300 Theobroma cacao
Thhalv10010210m.g Eutrema salsugineum
TPR.G14011 Trifolium pratense
TWI63G0552 Tripterygium wilfordii
unitig_62.g23894 Utricularia gibba
VMungo0720G2355 Vigna mungo
Zm00001eb007130 Zea mays

User provided reference genes

Program Settings