Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00430 Brassica napus
A09p54790 Brassica napus
Aa31LG10G16750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5144 Anthoceros agrestis
Actinidia32232 Actinidia chinensis
Ah.12g052040 Amaranthus hybridus
AL5G45720 Arabidopsis lyrata
Aqoxy2G03077 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EUG2WG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NZ3ZKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UST23B Arachis hypogaea
AT3G62940 Arabidopsis thaliana
ATR0564G214 Amborella trichopoda
ATR0665G323 Amborella trichopoda
Atru.chr4.1184 Acer truncatum
AUR62002550 Chenopodium quinoa
AUR62029964 Chenopodium quinoa
BcaB02g07311 Brassica carinata
BcaB02g08087 Brassica carinata
BcaC02g10325 Brassica carinata
BolC4t24563H Brassica oleracea
BolC8t51348H Brassica oleracea
BraA04t15762Z Brassica rapa
BraA09t40888Z Brassica rapa
C04p30300 Brassica napus
C08p37650 Brassica napus
CAN.G276.6 Capsicum annuum
CANSAT25G3366 Cannabis sativa
CARHR173230 Cardamine hirsuta
Carub.0005s2959 Capsella rubella
Ca_09122_v3 Cicer arietinum L.
CBR_g50012 Chara braunii
Cc07_g16220 Coffea canephora
CDE04G3078 Ceratophyllum demersum
Cfa006013 Carpinus fangiana
Cfa025660 Carpinus fangiana
Ciclev10021031m.g Citrus clementina
CiPaw.07G101900 Carya illinoinensis
ClCG09G006320 Citrullus lanatus
COL.COLO4_08010 Corchorus olitorius
Cpa.g.sc9.185 Carica papaya
Cre01.g028550 Chlamydomonas reinhardtii
CsaV3_7G028820 Cucumis sativus L.
CSS0017761 Camellia sinensis var. sinensis
CSS0021362 Camellia sinensis var. sinensis
CSS0027333 Camellia sinensis var. sinensis
CSS0041271 Camellia sinensis var. sinensis
DCAR_003965 Daucus carota
Dinv33007 Davidia involucrata
Duzib133G0389 Durio zibethinus
Duzib138G1810 Durio zibethinus
ECA234G3298 Erigeron canadensis
ECA247G4081 Erigeron canadensis
EL10Ac1g00719 Beta vulgaris
EL10Ac3g06247 Beta vulgaris
Eucgr.K03447 Eucalyptus grandis
FAN20G2356 Fragaria x ananassa
FAN24G2129 Fragaria x ananassa
FvH4_2g14201 Fragaria vesca
Glyma.03G210300 Glycine max
Glyma.19G207500 Glycine max
Gohir.A08G116900 Gossypium hirsutum
Gohir.D08G137700 Gossypium hirsutum
Gohir.D12G008800 Gossypium hirsutum
Gorai.004G141000 Gossypium raimondii
Gorai.008G008700 Gossypium raimondii
GSVIVG01010986001 Vitis vinifera
HanXRQChr12g0357681 Helianthus annuus
HanXRQChr16g0511311 Helianthus annuus
Haze_04835 Corylus avellana
Hma1.2p1_0209F.1_g088950 Hydrangea macrophylla
Hma1.2p1_0399F.1_g144060 Hydrangea macrophylla
HPP92_002250 Vanilla planifolia
Hund18046 Selenicereus undatus
Lalb_Chr04g0259741 Lupinus albus
Lj1g0005840 Lotus japonicus
Lj6A760G44 Lonicera japonica
Lsat_1_v5_gn_5_90141 Lactuca sativa
Manes.01G214900 Manihot esculenta
Manes.05G066800 Manihot esculenta
Mapoly0036s0154 Marchantia polymorpha
MBI02_g41662_MAGBIO Magnolia biondii
MBI13_g04790_MAGBIO Magnolia biondii
MCO04G021 Micromonas commoda
MD03G1278200 Malus domestica
MD11G1300200 Malus domestica
Medtr4g104580 Medicago truncatula
Medtr7g108240 Medicago truncatula
MELO3C016054.2 Cucumis melo
Migut.B00780 Erythranthe guttata
MSTRG.16494 Avicennia marina
Nitab4.5_0000431g0150 Nicotiana tabacum
Nitab4.5_0000492g0210 Nicotiana tabacum
Nitab4.5_0008505g0010 Nicotiana tabacum
Nitab4.5_0013619g0010 Nicotiana tabacum
Nn1g09463 Nelumbo nucifera
Nn1g09466 Nelumbo nucifera
Oeu028371.1 Olea europaea
Os04g0619500 Oryza sativa ssp. japonica
Peaxi162Scf01132g00228 Petunia axillaris
PGR044G2036 Punica granatum
PGSC0003DMG400016587 Solanum tuberosum
Phvul.001G203400 Phaseolus vulgaris
Potri.014G134100 Populus trichocarpa
Pp3c15_4060 Physcomitrium patens
PRCOL_00000140 Prasinoderma coloniale
PRCOL_00001709 Prasinoderma coloniale
Prupe.2G090200 Prunus persica
Prupe.8G254400 Prunus persica
Psat3g025640 Pisum sativum
PSO170G6158 Papaver somniferum
PSO210G5824 Papaver somniferum
QL10p015953 Quercus lobata
QL12p024404 Quercus lobata
RcHm_v2.0_Chr3g0496291 Rosa chinensis
RcHm_v2.0_Chr5g0001231 Rosa chinensis
RcHm_v2.0_Chr6g0247511 Rosa chinensis
RcHm_v2.0_Chr6g0292881 Rosa chinensis
Rhsim13G0016000 Rhododendron simsii
Sabra14G0100000 Salix brachista
Sc24g0001270 Simmondsia chinensis
Sc24g0001280 Simmondsia chinensis
Sed0018657 Sechium edule
Sed0022397 Sechium edule
SEGI_33648 Sequoiadendron giganteum
SGA_v2.0_scaffold304G47908 Striga asiatica
SHI20216 Sapria himalayana
SMO196G0226 Selaginella moellendorffii
SMO196G0254 Selaginella moellendorffii
SMO234G0054 Selaginella moellendorffii
Solyc04g053080.4 Solanum lycopersicum
Sopen04g023370 Solanum pennellii
Sp5g00580 Schrenkiella parvula
TAR369G0925 Trochodendron aralioides
THA.LOC104802209 Tarenaya hassleriana
Thecc.01G292600 Theobroma cacao
Thhalv10006094m.g Eutrema salsugineum
TPR.G32271 Trifolium pratense
TWI59G0122 Tripterygium wilfordii
unitig_26.g9038 Utricularia gibba
vmacro02497 Vaccinium macrocarpon
VMungo1383G1398 Vigna mungo
Zm00001eb212540 Zea mays

User provided reference genes

Program Settings