Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p35920 Brassica napus
A10p05200 Brassica napus
Aa31LG1G7660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1083 Anthoceros agrestis
Actinidia11207 Actinidia chinensis
Ah.10g035950 Amaranthus hybridus
AL1G16590 Arabidopsis lyrata
Aqoxy4G00092 Aquilegia oxysepala
Aqoxy4G00097 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9TU2QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRP0UJ Arachis hypogaea
AT1G06560 Arabidopsis thaliana
ATR0585G013 Amborella trichopoda
ATR0585G094 Amborella trichopoda
Atru.chr6.2050 Acer truncatum
AUR62012368 Chenopodium quinoa
BcaB02g06781 Brassica carinata
BcaC07g36798 Brassica carinata
BcaNung07076 Brassica carinata
BolC5t29253H Brassica oleracea
BolC8t47061H Brassica oleracea
BraA08t35499Z Brassica rapa
BraA10t42787Z Brassica rapa
C05p04800 Brassica napus
C08p02650 Brassica napus
CAN.G275.11 Capsicum annuum
CANSAT64G0469 Cannabis sativa
CARHR006170 Cardamine hirsuta
Carub.0001s0593 Capsella rubella
Ca_06266_v3 Cicer arietinum L.
CBR_g38934 Chara braunii
Cc05_g01700 Coffea canephora
CDE02G3568 Ceratophyllum demersum
Cfa023077 Carpinus fangiana
Ciclev10031016m.g Citrus clementina
CiPaw.04G138100 Carya illinoinensis
CiPaw.04G138300 Carya illinoinensis
ClCG11G016530 Citrullus lanatus
COL.COLO4_08888 Corchorus olitorius
Cpa.g.sc50.107 Carica papaya
Cre11.g476450 Chlamydomonas reinhardtii
Cre13.g606200 Chlamydomonas reinhardtii
CsaV3_4G031990 Cucumis sativus L.
CSS0009662 Camellia sinensis var. sinensis
CSS0010052 Camellia sinensis var. sinensis
CSS0016258 Camellia sinensis var. sinensis
DCAR_016942 Daucus carota
Dinv18821 Davidia involucrata
Duzib133G0867 Durio zibethinus
Duzib138G1377 Durio zibethinus
ECA234G1968 Erigeron canadensis
EL10Ac2g04244 Beta vulgaris
Eucgr.K01225 Eucalyptus grandis
FAN02G0734 Fragaria x ananassa
FAN05G5670 Fragaria x ananassa
FAN09G0570 Fragaria x ananassa
FAN14G4003 Fragaria x ananassa
FvH4_6g38630 Fragaria vesca
Glyma.14G030100 Glycine max
Gohir.A11G157100 Gossypium hirsutum
Gohir.D11G164100 Gossypium hirsutum
Gorai.007G174900 Gossypium raimondii
GSVIVG01020840001 Vitis vinifera
HanXRQChr01g0028511 Helianthus annuus
HanXRQChr09g0260261 Helianthus annuus
Haze_13536 Corylus avellana
Haze_13537 Corylus avellana
Haze_13538 Corylus avellana
Haze_13539 Corylus avellana
Hma1.2p1_0147F.1_g065830 Hydrangea macrophylla
Hma1.2p1_0147F.1_g065840 Hydrangea macrophylla
HPP92_023436 Vanilla planifolia
Hund02144 Selenicereus undatus
Lalb_Chr04g0248901 Lupinus albus
Lj1A593G32 Lonicera japonica
LjContig00049g0017299 Lotus japonicus
Lsat_1_v5_gn_3_94440 Lactuca sativa
Lsat_1_v5_gn_4_120101 Lactuca sativa
Lsat_1_v5_gn_4_133180 Lactuca sativa
Lsat_1_v5_gn_4_26360 Lactuca sativa
Lsat_1_v5_gn_4_60740 Lactuca sativa
Manes.02G208560 Manihot esculenta
Mapoly0025s0011 Marchantia polymorpha
MBI07_g26360_MAGBIO Magnolia biondii
MBI07_g26361_MAGBIO Magnolia biondii
MBI07_g45791_MAGBIO Magnolia biondii
MD09G1148600 Malus domestica
MD09G1148800 Malus domestica
MD09G1148900 Malus domestica
MD17G1135100 Malus domestica
Medtr5g091110 Medicago truncatula
MELO3C022960.2 Cucumis melo
Migut.M00059 Erythranthe guttata
MSTRG.14909 Avicennia marina
Nitab4.5_0001552g0030 Nicotiana tabacum
Nitab4.5_0001552g0040 Nicotiana tabacum
Nitab4.5_0005142g0010 Nicotiana tabacum
Nitab4.5_0005142g0020 Nicotiana tabacum
Nn3g20733 Nelumbo nucifera
Oeu029978.1 Olea europaea
Os08g0365900 Oryza sativa ssp. japonica
Peaxi162Scf00359g00710 Petunia axillaris
PGR142G1004 Punica granatum
PGSC0003DMG400017390 Solanum tuberosum
Phvul.008G194100 Phaseolus vulgaris
Potri.005G204900 Populus trichocarpa
Pp3c12_23090 Physcomitrium patens
Prupe.3G177300 Prunus persica
Psat2g017040 Pisum sativum
PSO339G1684 Papaver somniferum
PSO339G5406 Papaver somniferum
PSO384G0241 Papaver somniferum
QL11p000196 Quercus lobata
RcHm_v2.0_Chr2g0152091 Rosa chinensis
Rhsim12G0010200 Rhododendron simsii
Sabra05G0155700 Salix brachista
SalBow7G0619 Salvia bowleyana
Sc09g0008320 Simmondsia chinensis
Sed0027803 Sechium edule
SEGI_00594 Sequoiadendron giganteum
SEGI_40841 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24489 Striga asiatica
SHI03271 Sapria himalayana
SHI03273 Sapria himalayana
SMO111G0017 Selaginella moellendorffii
SMO293G0021 Selaginella moellendorffii
Solyc07g045070.3 Solanum lycopersicum
Sopen07g023630 Solanum pennellii
Sp1g05320 Schrenkiella parvula
TAR627G0108 Trochodendron aralioides
TAR627G0226 Trochodendron aralioides
THA.LOC104826242 Tarenaya hassleriana
Thecc.01G169500 Theobroma cacao
Thhalv10007146m.g Eutrema salsugineum
TPR.G10159 Trifolium pratense
TPR.G7347 Trifolium pratense
TWI23G0800 Tripterygium wilfordii
unitig_899.g15343 Utricularia gibba
vmacro08733 Vaccinium macrocarpon
vmacro08734 Vaccinium macrocarpon
vmacro08735 Vaccinium macrocarpon
VMungo0647G1913 Vigna mungo
Zm00001eb170650 Zea mays

User provided reference genes

Program Settings