Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p09430 Brassica napus
A08p10630 Brassica napus
A09p34920 Brassica napus
Aa31LG9G15960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4326 Anthoceros agrestis
Actinidia29307 Actinidia chinensis
Actinidia33638 Actinidia chinensis
Ah.01g008620 Amaranthus hybridus
Ah.01g022810 Amaranthus hybridus
AL1G49710 Arabidopsis lyrata
Aqoxy1G01510 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7UV7DW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PX7M3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VHAI7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA91TC Arachis hypogaea
AT1G31330 Arabidopsis thaliana
ATR0763G286 Amborella trichopoda
Atru.chr10.620 Acer truncatum
AUR62010064 Chenopodium quinoa
AUR62013057 Chenopodium quinoa
BcaB04g18162 Brassica carinata
BcaB07g32794 Brassica carinata
BcaC03g16812 Brassica carinata
BcaC05g27163 Brassica carinata
BcaC07g37765 Brassica carinata
BolC5t31789H Brassica oleracea
BolC7t41950H Brassica oleracea
BolC8t48151H Brassica oleracea
BraA07t28739Z Brassica rapa
BraA08t33062Z Brassica rapa
BraA09t39022Z Brassica rapa
C05p30540 Brassica napus
C07p14510 Brassica napus
CAN.G675.15 Capsicum annuum
CAN.G675.17 Capsicum annuum
CANSAT35G1185 Cannabis sativa
CARHR030790 Cardamine hirsuta
Carub.0001s2977 Capsella rubella
Ca_00782_v3 Cicer arietinum L.
Ca_31080_v3 Cicer arietinum L.
CBR_g568 Chara braunii
Cc09_g06610 Coffea canephora
CDE01G0253 Ceratophyllum demersum
CDE02G3915 Ceratophyllum demersum
CDE05G2870 Ceratophyllum demersum
CDE12G0048 Ceratophyllum demersum
CDE12G0451 Ceratophyllum demersum
Cfa000743 Carpinus fangiana
Ciclev10016540m.g Citrus clementina
CiPaw.09G150600 Carya illinoinensis
CiPaw.10G112100 Carya illinoinensis
ClCG01G009000 Citrullus lanatus
COL.COLO4_30928 Corchorus olitorius
Cpa.g.sc882.3 Carica papaya
Cre09.g412100 Chlamydomonas reinhardtii
CsaV3_1G046680 Cucumis sativus L.
Dinv01911 Davidia involucrata
Duzib160G0628 Durio zibethinus
Duzib235G0861 Durio zibethinus
ECA234G0485 Erigeron canadensis
EL10Ac9g21406 Beta vulgaris
Eucgr.K00389 Eucalyptus grandis
FAN21G3936 Fragaria x ananassa
FAN25G3276 Fragaria x ananassa
FvH4_3g11800 Fragaria vesca
Glyma.05G022900 Glycine max
Gohir.A05G143600 Gossypium hirsutum
Gohir.A06G138900 Gossypium hirsutum
Gohir.D05G145900 Gossypium hirsutum
Gohir.D06G146300 Gossypium hirsutum
Gorai.009G149800 Gossypium raimondii
Gorai.010G170600 Gossypium raimondii
HanXRQChr12g0368521 Helianthus annuus
HanXRQChr16g0517321 Helianthus annuus
HanXRQChr17g0563071 Helianthus annuus
Haze_21115 Corylus avellana
Haze_21121 Corylus avellana
Hma1.2p1_0326F.1_g126220 Hydrangea macrophylla
HPP92_017743 Vanilla planifolia
Lalb_Chr18g0057801 Lupinus albus
Lalb_Chr20g0119941 Lupinus albus
Lj1A1140T41 Lonicera japonica
Lj6g0012734 Lotus japonicus
Lsat_1_v5_gn_6_37081 Lactuca sativa
Manes.16G056000 Manihot esculenta
Mapoly0075s0057 Marchantia polymorpha
MCO07G173 Micromonas commoda
MD05G1259200 Malus domestica
MD10G1238800 Malus domestica
Medtr2g029370 Medicago truncatula
MELO3C021788.2 Cucumis melo
Migut.M01951 Erythranthe guttata
MSTRG.16324 Avicennia marina
MSTRG.7576 Avicennia marina
Nitab4.5_0001219g0180 Nicotiana tabacum
Nitab4.5_0001312g0020 Nicotiana tabacum
Nitab4.5_0005250g0030 Nicotiana tabacum
Nitab4.5_0008761g0030 Nicotiana tabacum
Nn7g37951 Nelumbo nucifera
Oeu008714.1 Olea europaea
Oeu008978.1 Olea europaea
Os03g0778100 Oryza sativa ssp. japonica
Peaxi162Scf00267g01017 Petunia axillaris
PGSC0003DMG400021144 Solanum tuberosum
Phvul.L001631 Phaseolus vulgaris
Potri.001G081500 Populus trichocarpa
Potri.003G148900 Populus trichocarpa
Pp3c11_18230 Physcomitrium patens
Pp3c18_10730 Physcomitrium patens
Pp3c21_8800 Physcomitrium patens
Pp3c22_10850 Physcomitrium patens
PRCOL_00005797 Prasinoderma coloniale
Prupe.4G105600 Prunus persica
Psat1g169240 Pisum sativum
PSO017G5348 Papaver somniferum
PSO170G0936 Papaver somniferum
QL05p062860 Quercus lobata
RcHm_v2.0_Chr5g0019221 Rosa chinensis
Rhsim13G0127200 Rhododendron simsii
Sabra01G0058700 Salix brachista
Sc10g0008690 Simmondsia chinensis
Sed0015115 Sechium edule
Sed0028144 Sechium edule
SGA_v2.0_scaffold223G42900 Striga asiatica
SGA_v2.0_scaffold298G47643 Striga asiatica
SMO367G0762 Selaginella moellendorffii
Solyc02g069450.3 Solanum lycopersicum
Solyc02g069460.3 Solanum lycopersicum
Solyc08g074307.2 Solanum lycopersicum
Sopen02g018590 Solanum pennellii
Sopen02g018600 Solanum pennellii
Sp1g27160 Schrenkiella parvula
TAR626G0502 Trochodendron aralioides
THA.LOC104814370 Tarenaya hassleriana
Thecc.06G135600 Theobroma cacao
Thhalv10008731m.g Eutrema salsugineum
TPR.G26533 Trifolium pratense
TWI09G0987 Tripterygium wilfordii
TWI73G1099 Tripterygium wilfordii
unitig_92.g28186 Utricularia gibba
vmacro03483 Vaccinium macrocarpon
VMungo1215G2240 Vigna mungo
Zm00001eb213670 Zea mays

User provided reference genes

Program Settings