Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p14170 Brassica napus
Aa31LG3G12780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis
Actinidia25250 Actinidia chinensis
Actinidia39715 Actinidia chinensis
Ah.09g228240 Amaranthus hybridus
AL8G32750 Arabidopsis lyrata
Aqoxy7G04044 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BFBS1X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea
AT5G56900 Arabidopsis thaliana
ATR0789G123 Amborella trichopoda
ATR0789G159 Amborella trichopoda
Atru.BG.14.p Acer truncatum
Atru.chr7.1595 Acer truncatum
AUR62029068 Chenopodium quinoa
AUR62033961 Chenopodium quinoa
BcaB08g36046 Brassica carinata
BcaC04g20043 Brassica carinata
BcaNung02827 Brassica carinata
BcaNung02829 Brassica carinata
BcaNung03955 Brassica carinata
BolC6t35802H Brassica oleracea
BolC7t44699H Brassica oleracea
BolC9t57695H Brassica oleracea
BolC9t57946H Brassica oleracea
BolC9t57947H Brassica oleracea
BraA10t43510Z Brassica rapa
C06p07120 Brassica napus
C06p07130 Brassica napus
C07p41650 Brassica napus
C09p48540 Brassica napus
C09p50860 Brassica napus
CAN.G1241.24 Capsicum annuum
CANSAT56G1459 Cannabis sativa
CARHR270650 Cardamine hirsuta
Carub.0008s1736 Capsella rubella
Ca_21279_v3 Cicer arietinum L.
CBR_g54012 Chara braunii
Cc06_g11450 Coffea canephora
Cfa003082 Carpinus fangiana
Ciclev10010506m.g Citrus clementina
CiPaw.03G215300 Carya illinoinensis
ClCG03G015560 Citrullus lanatus
COL.COLO4_18153 Corchorus olitorius
COL.COLO4_18196 Corchorus olitorius
Cpa.g.sc61.41 Carica papaya
Cre07.g338700 Chlamydomonas reinhardtii
Cre07.g338800 Chlamydomonas reinhardtii
Cre07.g338900 Chlamydomonas reinhardtii
CsaV3_1G040480 Cucumis sativus L.
CSS0047543 Camellia sinensis var. sinensis
CSS0048193 Camellia sinensis var. sinensis
Dinv36771 Davidia involucrata
Duzib150G0576 Durio zibethinus
Duzib168G1322 Durio zibethinus
ECA232G2798 Erigeron canadensis
EL10Ac8g19209 Beta vulgaris
Eucgr.C00887 Eucalyptus grandis
FAN19G0073 Fragaria x ananassa
FAN23G1060 Fragaria x ananassa
FAN26G1479 Fragaria x ananassa
FAN26G3339 Fragaria x ananassa
FAN28G0072 Fragaria x ananassa
FvH4_1g07540 Fragaria vesca
Glyma.13G104400 Glycine max
Glyma.17G054700 Glycine max
Gohir.A06G072900 Gossypium hirsutum
Gohir.D06G071400 Gossypium hirsutum
Gorai.010G083200 Gossypium raimondii
GSVIVG01015197001 Vitis vinifera
HanXRQChr06g0178551 Helianthus annuus
Haze_25916 Corylus avellana
HPP92_009143 Vanilla planifolia
HPP92_009144 Vanilla planifolia
Lalb_Chr12g0199791 Lupinus albus
Lalb_Chr12g0199801 Lupinus albus
Lj4A303G24 Lonicera japonica
Lj4g0006207 Lotus japonicus
Lsat_1_v5_gn_8_87701 Lactuca sativa
Manes.03G034200 Manihot esculenta
Mapoly0009s0116 Marchantia polymorpha
MBI04_g31157_MAGBIO Magnolia biondii
MCO07G467 Micromonas commoda
MCO16G282 Micromonas commoda
MD02G1080200 Malus domestica
MD15G1207600 Malus domestica
MD15G1207700 Malus domestica
Medtr4g126260 Medicago truncatula
MELO3C015476.2 Cucumis melo
Migut.L01497 Erythranthe guttata
MSTRG.10560 Avicennia marina
Nitab4.5_0000540g0310 Nicotiana tabacum
Nitab4.5_0000540g0330 Nicotiana tabacum
Nitab4.5_0008523g0050 Nicotiana tabacum
Nn1g01730 Nelumbo nucifera
Nn8g38856 Nelumbo nucifera
Oeu018416.2 Olea europaea
Os09g0364000 Oryza sativa ssp. japonica
Peaxi162Scf00498g00321 Petunia axillaris
PGR142G3350 Punica granatum
PGSC0003DMG400000278 Solanum tuberosum
Phvul.003G136700 Phaseolus vulgaris
Potri.006G152100 Populus trichocarpa
Pp3c16_14300 Physcomitrium patens
PRCOL_00000275 Prasinoderma coloniale
Prupe.7G209200 Prunus persica
Psat4g015200 Pisum sativum
PSO210G1153 Papaver somniferum
PSO210G7113 Papaver somniferum
QL02p062545 Quercus lobata
RcHm_v2.0_Chr2g0093421 Rosa chinensis
Rhsim05G0020500 Rhododendron simsii
Sabra06G0120400 Salix brachista
Sc18g0002110 Simmondsia chinensis
Sed0019984 Sechium edule
SEGI_26696 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09390 Striga asiatica
SGA_v2.0_scaffold21G09392 Striga asiatica
SGA_v2.0_scaffold51G18862 Striga asiatica
SMO147G0126 Selaginella moellendorffii
SMO273G0018 Selaginella moellendorffii
Solyc05g032650.3 Solanum lycopersicum
Solyc12g008870.1 Solanum lycopersicum
Solyc12g008890.3 Solanum lycopersicum
Sopen05g023240 Solanum pennellii
Sopen12g003800 Solanum pennellii
Sopen12g003810 Solanum pennellii
Sp6g18620 Schrenkiella parvula
TAR624G0724 Trochodendron aralioides
THA.LOC104817759 Tarenaya hassleriana
Thecc.09G088600 Theobroma cacao
Thhalv10013022m.g Eutrema salsugineum
TPR.G9472 Trifolium pratense
TWI34G0442 Tripterygium wilfordii
unitig_8.g4690 Utricularia gibba
vmacro17238 Vaccinium macrocarpon
vmacro17241 Vaccinium macrocarpon
vmacro17242 Vaccinium macrocarpon
vmacro22302 Vaccinium macrocarpon
VMungo1215G2738 Vigna mungo
VMungo1383G3543 Vigna mungo
Zm00001eb311020 Zea mays

User provided reference genes

Program Settings