Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p19870 Brassica napus
A05p28310 Brassica napus
A06p02830 Brassica napus
Aa31LG10G3330 Aethionema arabicum
Actinidia05108 Actinidia chinensis
Actinidia09913 Actinidia chinensis
Ah.06g182920 Amaranthus hybridus
AL1G58630 Arabidopsis lyrata
AL8G37450 Arabidopsis lyrata
Aqoxy1G03622 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea
AT1G50900 Arabidopsis thaliana
ATR0752G229 Amborella trichopoda
Atru.chr2.3276 Acer truncatum
Atru.chr2.3277 Acer truncatum
AUR62015702 Chenopodium quinoa
AUR62020502 Chenopodium quinoa
BcaB02g11192 Brassica carinata
BcaB06g26188 Brassica carinata
BcaB07g33530 Brassica carinata
BcaB07g33531 Brassica carinata
BcaC05g27382 Brassica carinata
BcaC05g27384 Brassica carinata
BcaC08g43263 Brassica carinata
BolC5t33095H Brassica oleracea
BolC6t35720H Brassica oleracea
BraA05t20892Z Brassica rapa
BraA05t21713Z Brassica rapa
BraA06t23490Z Brassica rapa
C05p33210 Brassica napus
C05p43800 Brassica napus
C06p06070 Brassica napus
CAN.G1781.9 Capsicum annuum
CANSAT21G2135 Cannabis sativa
CARHR040940 Cardamine hirsuta
CARHR040950 Cardamine hirsuta
CARHR096310 Cardamine hirsuta
CARHR096330 Cardamine hirsuta
Carub.0001s3985 Capsella rubella
Carub.0003s2051 Capsella rubella
Ca_08298_v3 Cicer arietinum L.
CBR_g12744 Chara braunii
CBR_g602 Chara braunii
Cc05_g13500 Coffea canephora
CDE02G4799 Ceratophyllum demersum
CDE05G0273 Ceratophyllum demersum
CDE05G2685 Ceratophyllum demersum
CDE11G0574 Ceratophyllum demersum
Cfa020386 Carpinus fangiana
Cfa020388 Carpinus fangiana
Ciclev10009689m.g Citrus clementina
CiPaw.11G187100 Carya illinoinensis
ClCG10G005560 Citrullus lanatus
COL.COLO4_09631 Corchorus olitorius
Cpa.g.sc97.36 Carica papaya
Cre12.g551950 Chlamydomonas reinhardtii
CsaV3_3G005280 Cucumis sativus L.
CSS0021065 Camellia sinensis var. sinensis
Dinv22281 Davidia involucrata
Dinv40734 Davidia involucrata
Duzib213G0461 Durio zibethinus
ECA246G1486 Erigeron canadensis
EL10Ac4g07899 Beta vulgaris
Eucgr.F03446 Eucalyptus grandis
FAN11G3900 Fragaria x ananassa
FAN16G3206 Fragaria x ananassa
FAN21G3293 Fragaria x ananassa
FvH4_3g22190 Fragaria vesca
Glyma.08G312800 Glycine max
Glyma.09G102000 Glycine max
Glyma.18G102100 Glycine max
Gohir.A01G077300 Gossypium hirsutum
Gohir.A04G019300 Gossypium hirsutum
Gohir.D01G064800 Gossypium hirsutum
Gohir.D05G366500 Gossypium hirsutum
Gorai.002G085700 Gossypium raimondii
Gorai.009G425200 Gossypium raimondii
GSVIVG01002001001 Vitis vinifera
HanXRQChr05g0159111 Helianthus annuus
Haze_09646 Corylus avellana
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla
HPP92_017607 Vanilla planifolia
Lalb_Chr15g0080371 Lupinus albus
Lj6g0004310 Lotus japonicus
Lj8A167T50 Lonicera japonica
Lsat_1_v5_gn_5_5181 Lactuca sativa
Manes.03G127000 Manihot esculenta
Manes.15G073900 Manihot esculenta
Mapoly0006s0110 Marchantia polymorpha
MBI02_g28338_MAGBIO Magnolia biondii
MCO16G329 Micromonas commoda
MD03G1207700 Malus domestica
Medtr3g019320 Medicago truncatula
MELO3C025397.2 Cucumis melo
Migut.M01785 Erythranthe guttata
MSTRG.15162 Avicennia marina
Nitab4.5_0001393g0170 Nicotiana tabacum
Nitab4.5_0005048g0030 Nicotiana tabacum
Nn1g07101 Nelumbo nucifera
Nn1g07102 Nelumbo nucifera
Oeu042920.1 Olea europaea
Oeu062605.1 Olea europaea
Os07g0520800 Oryza sativa ssp. japonica
Peaxi162Scf00387g00046 Petunia axillaris
PGR031G1044 Punica granatum
PGSC0003DMG400014394 Solanum tuberosum
Phvul.006G038600 Phaseolus vulgaris
Potri.001G420900 Populus trichocarpa
Pp3c5_16520 Physcomitrium patens
Pp3c6_9300 Physcomitrium patens
PRCOL_00000858 Prasinoderma coloniale
Prupe.4G209000 Prunus persica
Psat5g216840 Pisum sativum
PSO210G5271 Papaver somniferum
PSO832G4498 Papaver somniferum
QL08p011891 Quercus lobata
QL08p012062 Quercus lobata
RcHm_v2.0_Chr5g0038151 Rosa chinensis
Rhsim04G0000700 Rhododendron simsii
Rhsim04G0001800 Rhododendron simsii
Sabra16G0285800 Salix brachista
Sc16g0006280 Simmondsia chinensis
Sed0007548 Sechium edule
SEGI_08050 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45797 Striga asiatica
SMO137G0373 Selaginella moellendorffii
Solyc10g006370.3 Solanum lycopersicum
Sopen10g002320 Solanum pennellii
Sp1g37640 Schrenkiella parvula
Sp3g18550 Schrenkiella parvula
TAR624G0120 Trochodendron aralioides
TAR626G0063 Trochodendron aralioides
THA.LOC104798778 Tarenaya hassleriana
Thecc.07G044000 Theobroma cacao
Thhalv10011819m.g Eutrema salsugineum
Thhalv10021639m.g Eutrema salsugineum
TPR.G3850 Trifolium pratense
TWI38G0945 Tripterygium wilfordii
unitig_578.g16003 Utricularia gibba
vmacro09735 Vaccinium macrocarpon
VMungo0540G0590 Vigna mungo
Zm00001eb322850 Zea mays

User provided reference genes

Program Settings