Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09140 Brassica napus
A08p07360 Brassica napus
Aa31LG9G5690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2854 Anthoceros agrestis
Actinidia23346 Actinidia chinensis
Actinidia23801 Actinidia chinensis
Actinidia34531 Actinidia chinensis
Ah.04g158950 Amaranthus hybridus
AL9U11740 Arabidopsis lyrata
Aqoxy2G04070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18YQBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF538D Arachis hypogaea
AT4G12800 Arabidopsis thaliana
ATR1147G045 Amborella trichopoda
Atru.chr6.3527 Acer truncatum
AUR62000314 Chenopodium quinoa
AUR62006659 Chenopodium quinoa
BcaB03g16154 Brassica carinata
BcaB04g17739 Brassica carinata
BcaC02g09463 Brassica carinata
BcaC07g37428 Brassica carinata
BolC4t25883H Brassica oleracea
BolC8t47751H Brassica oleracea
BraA08t32752Z Brassica rapa
C04p43050 Brassica napus
C08p09050 Brassica napus
CAN.G874.38 Capsicum annuum
CAN.G874.39 Capsicum annuum
CANSAT54G2118 Cannabis sativa
CARHR218150 Cardamine hirsuta
Carub.0007s3001 Capsella rubella
Ca_07979_v3 Cicer arietinum L.
CBR_g27900 Chara braunii
Cc01_g15890 Coffea canephora
CDE06G0966 Ceratophyllum demersum
CDE06G2797 Ceratophyllum demersum
Cfa006268 Carpinus fangiana
Ciclev10016637m.g Citrus clementina
CiPaw.07G079800 Carya illinoinensis
ClCG11G010740 Citrullus lanatus
COL.COLO4_07353 Corchorus olitorius
Cpa.g.sc8.42 Carica papaya
Cre12.g486300 Chlamydomonas reinhardtii
CsaV3_2G009680 Cucumis sativus L.
CSS0044510 Camellia sinensis var. sinensis
DCAR_012704 Daucus carota
DCAR_018610 Daucus carota
Dinv28794 Davidia involucrata
Duzib138G0242 Durio zibethinus
ECA236G3288 Erigeron canadensis
ECA247G0242 Erigeron canadensis
EL10Ac4g09972 Beta vulgaris
Eucgr.K02362 Eucalyptus grandis
FAN02G4095 Fragaria x ananassa
FAN05G0704 Fragaria x ananassa
FAN09G4314 Fragaria x ananassa
FAN14G1738 Fragaria x ananassa
FvH4_6g00530 Fragaria vesca
Glyma.09G250800 Glycine max
Glyma.18G241700 Glycine max
Gohir.A07G089500 Gossypium hirsutum
Gohir.A07G160500 Gossypium hirsutum
Gohir.D07G094300 Gossypium hirsutum
Gohir.D07G168100 Gossypium hirsutum
Gorai.001G101200 Gossypium raimondii
Gorai.N002100 Gossypium raimondii
GSVIVG01019114001 Vitis vinifera
HanXRQChr08g0231801 Helianthus annuus
HanXRQChr12g0363961 Helianthus annuus
Haze_04550 Corylus avellana
Hma1.2p1_0171F.1_g075540 Hydrangea macrophylla
Hund07343 Selenicereus undatus
Lalb_Chr01g0020361 Lupinus albus
Lalb_Chr19g0127611 Lupinus albus
Lj1g0022024 Lotus japonicus
Lj1P104T52 Lonicera japonica
Lj2P1112T20 Lonicera japonica
Lsat_1_v5_gn_8_98481 Lactuca sativa
Lsat_1_v5_gn_9_16861 Lactuca sativa
Manes.12G055600 Manihot esculenta
Mapoly0102s0025 Marchantia polymorpha
MBI07_g06134_MAGBIO Magnolia biondii
MCO13G042 Micromonas commoda
MD04G1244400 Malus domestica
MD12G1260300 Malus domestica
Medtr7g079900 Medicago truncatula
MELO3C008731.2 Cucumis melo
Migut.D00776 Erythranthe guttata
MSTRG.12743 Avicennia marina
MSTRG.17960 Avicennia marina
Nitab4.5_0001348g0080 Nicotiana tabacum
Nitab4.5_0001348g0130 Nicotiana tabacum
Nitab4.5_0007144g0010 Nicotiana tabacum
Nitab4.5_0014403g0020 Nicotiana tabacum
Nn1g09761 Nelumbo nucifera
Oeu013526.1 Olea europaea
Oeu025298.1 Olea europaea
Os12g0420400 Oryza sativa ssp. japonica
Peaxi162Scf00841g00210 Petunia axillaris
Peaxi162Scf01242g00025 Petunia axillaris
PGR044G1943 Punica granatum
PGR083G1330 Punica granatum
PGSC0003DMG400027671 Solanum tuberosum
PGSC0003DMG400027672 Solanum tuberosum
Phvul.008G054400 Phaseolus vulgaris
Potri.002G239700 Populus trichocarpa
Potri.014G175600 Populus trichocarpa
Pp3c16_5670 Physcomitrium patens
Pp3c27_2310 Physcomitrium patens
Pp3c5_4200 Physcomitrium patens
PRCOL_00002830 Prasinoderma coloniale
Prupe.6G361000 Prunus persica
Psat3g138440 Pisum sativum
PSO017G0175 Papaver somniferum
PSO675G2116 Papaver somniferum
QL01p048658 Quercus lobata
RcHm_v2.0_Chr3g0447921 Rosa chinensis
Rhsim01G0247800 Rhododendron simsii
Sabra02G0182500 Salix brachista
Sabra14G0134400 Salix brachista
SalBow3G3798 Salvia bowleyana
Sed0003052 Sechium edule
Sed0023204 Sechium edule
SEGI_02964 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12061 Striga asiatica
Solyc06g082940.3 Solanum lycopersicum
Solyc06g082950.4 Solanum lycopersicum
Sopen06g034330 Solanum pennellii
Sopen06g034340 Solanum pennellii
Sp7g09420 Schrenkiella parvula
TAR365G0963 Trochodendron aralioides
THA.LOC104808816 Tarenaya hassleriana
Thecc.01G207800 Theobroma cacao
Thecc.05G199500 Theobroma cacao
Thhalv10026195m.g Eutrema salsugineum
TPR.G30351 Trifolium pratense
TWI18G1321 Tripterygium wilfordii
TWI36G1337 Tripterygium wilfordii
unitig_0.g420 Utricularia gibba
unitig_60.g25573 Utricularia gibba
vmacro14690 Vaccinium macrocarpon
VMungo1383G0609 Vigna mungo
Zm00001eb123000 Zea mays
Zm00001eb336580 Zea mays

User provided reference genes

Program Settings